Man pages for ecocomDP
Tools to Create, Use, and Convert ecocomDP Data

annotation_dictionaryAnnotations of published data
ants_L0_flatJoined and flat version of EDI data package...
ants_L1The ecocomDP (L1) version of EDI data package...
calc_geo_extent_bounding_box_m2Calculate geo_extent_bounding_box_m2 for the dataset_summary...
calc_length_of_survey_yearsCalculate length_of_survey_years for the dataset_summary...
calc_number_of_years_sampledCalculate number_of_years_sampled for the dataset_summary...
calc_std_dev_interval_betw_yearsCalculate std_dev_interval_betw_years for the dataset_summary...
convert_to_dwcaConvert a dataset to the Darwin Core Archive format
create_dataset_summaryCreate the dataset_summary table
create_emlCreate EML metadata
create_locationCreate the location table
create_location_ancillaryCreate the location_ancillary table
create_observationCreate the observation table
create_observation_ancillaryCreate the observation_ancillary table
create_taxonCreate the taxon table
create_taxon_ancillaryCreate the taxon_ancillary table
create_variable_mappingCreate the variable_mapping table
flatten_dataFlatten a dataset
plot_sample_space_timePlot dates and times samples were collected or observations...
plot_sitesPlot sites on US map
plot_taxa_abundPlot mean taxa abundances per 'observation_id'
plot_taxa_accum_sitesPlot taxa accumulation by site accumulation
plot_taxa_accum_timePlot taxa accumulation through time
plot_taxa_diversityPlot diversity (taxa richness) through time
plot_taxa_occur_freqPlot taxon occurrence frequencies
plot_taxa_rankPlot taxa ranks
plot_taxa_sample_timePlot dates and times samples were taken (DEPRECATED)
plot_taxa_shared_sitesPlot number of unique taxa shared across sites
read_dataRead published data
save_dataSave a dataset
search_dataSearch published data
validate_dataValidate tables against the model
write_tablesWrite tables to file
ecocomDP documentation built on Oct. 19, 2021, 1:08 a.m.