resultNest_4p_normal: Result of the fit using the nest database using asymmetric...

In embryogrowth: Tools to Analyze the Thermal Reaction Norm of Embryo Growth

Result of the fit using the nest database using asymmetric normal function

Description

Fit using the nest database using asymmetric normal function

Usage

resultNest_4p_normal

Format

A list with fitted information about data(nest)

Details

Result of the fit using the nest database using asymmetric normal function

Author(s)

Marc Girondot [e-mail]

References

Girondot, M., & Kaska, Y. (2014). A model to predict the thermal reaction norm for the embryo growth rate from field data. Journal of Thermal Biology, 45, 96-102. doi: 10.1016/j.jtherbio.2014.08.005

Examples

## Not run: 
library(embryogrowth)
data(nest)
formated <- FormatNests(nest)
x <- ChangeSSM(temperatures = (200:350)/10,
               parameters = resultNest_4p_SSM$par,
               initial.parameters = structure(c(3, 7, 11, 32), 
                               .Names = c("Scale", "sdL", "sdH", "Peak")), 
               control=list(maxit=1000))
pfixed <- c(rK=2.093313)
resultNest_4p_normal <- searchR(parameters=x$par, fixed.parameters=pfixed, 
                         temperatures=formated, integral=integral.Gompertz, M0=1.7, 
                         hatchling.metric=c(Mean=39.33, SD=1.92))
plotR(resultNest_4p_normal, ylim=c(0, 3))
plotR(resultNest_4p_normal, ylim=c(0, 3), ylimH = c(0, 0.9), show.hist=TRUE)
compare_AIC(SSM=resultNest_4p_SSM, Asymmetric.normal=resultNest_4p_normal)

## End(Not run)

embryogrowth documentation built on Sept. 11, 2024, 8:16 p.m.