epitools: Epidemiology Tools

EpiTools: R Package for Epidemiologic Data and Graphics

Author
Tomas J. Aragon Developer [aut, cre], Michael P. Fay User [ctb], Daniel Wollschlaeger User [ctb]
Date of publication
2012-09-30 09:29:17
Maintainer
Tomas J. Aragon Developer <aragon@berkeley.edu>
License
GPL (>= 2)
Version
0.5-7
URLs

View on CRAN

Man pages

ageadjust.direct
Age standardization by direct method, with exact confidence...
ageadjust.indirect
Age standardization by indirect method, with exact confidence...
as.hour
Convert date-time object into hour units
as.month
Convert dates into months of the year for plotting epidemic...
as.week
Convert dates object in 'disease week' for plotting epidemic...
binom.conf.int
Confidence intervals for binomial counts or proportions
colorbrewer
Display and create ColorBrewer palettes
colors.plot
Plots R's 657 named colors for selection
epicurve
Construct an epidemic curve
epidate
Convert dates into multiple legible formats
epitab
Epidemiologic tabulation for a cohort or case-control study
epitable
Create r x c contigency table (exposure levels vs. binary...
expand.table
Expand contingency table into individual-level data set
expected
Expected values in a table
julian2date
Convert a julian date into standard a date format
kapmeier
Implements product-limit (Kaplan-Meier) method
oddsratio
Odds ratio estimation and confidence intervals
or.midp
Odds ratio estimation and confidence intervals using mid-p...
ormidp.test
odds ratio test for independence (p value) for a 2x2 table
oswego
Outbreak of Gastrointestinal Illness in Oswego County, 1940
pois.conf.int
Confidence intervals for Poisson counts or rates
rate2by2.test
Comparative tests of independence in rx2 rate tables
rateratio
Rate ratio estimation and confidence intervals
ratetable
Create r x 2 count and person-time table for calculating...
riskratio
Risk ratio estimation and confidence intervals
tab2by2.test
Comparative tests of independence in rx2 contigency tables
table.margins
Marginal totals of a table
wcgs
Western Collaborative Group Study data
wnv
West Nile Virus human cases reported in California, USA, as...

Files in this package

epitools
epitools/MD5
epitools/man
epitools/man/rate2by2.test.Rd
epitools/man/table.margins.Rd
epitools/man/expand.table.Rd
epitools/man/ormidp.test.Rd
epitools/man/ageadjust.direct.Rd
epitools/man/julian2date.Rd
epitools/man/epicurve.Rd
epitools/man/oddsratio.Rd
epitools/man/epidate.Rd
epitools/man/ratetable.Rd
epitools/man/expected.Rd
epitools/man/colorbrewer.Rd
epitools/man/as.month.Rd
epitools/man/pois.conf.int.Rd
epitools/man/wnv.Rd
epitools/man/kapmeier.Rd
epitools/man/riskratio.Rd
epitools/man/oswego.Rd
epitools/man/tab2by2.test.Rd
epitools/man/colors.plot.Rd
epitools/man/as.hour.Rd
epitools/man/or.midp.Rd
epitools/man/ageadjust.indirect.Rd
epitools/man/as.week.Rd
epitools/man/epitable.Rd
epitools/man/rateratio.Rd
epitools/man/binom.conf.int.Rd
epitools/man/epitab.Rd
epitools/man/wcgs.Rd
epitools/DESCRIPTION
epitools/R
epitools/R/rateratio.midp.R
epitools/R/epitab.R
epitools/R/riskratio.R
epitools/R/pois.byar.R
epitools/R/expected.R
epitools/R/colorbrewer.pallette.R
epitools/R/pois.approx.R
epitools/R/oddsratio.wald.R
epitools/R/as.week.R
epitools/R/epicurve.weeks.R
epitools/R/epicurve.hours.R
epitools/R/pois.daly.R
epitools/R/epicurve.months.R
epitools/R/riskratio.wald.R
epitools/R/table.margins.R
epitools/R/as.month.R
epitools/R/oddsratio.midp.R
epitools/R/rateratio.wald.R
epitools/R/riskratio.boot.R
epitools/R/oddsratio.R
epitools/R/kapmeier.R
epitools/R/as.hour.R
epitools/R/binom.exact.R
epitools/R/ageadjust.indirect.R
epitools/R/tab2by2.test.R
epitools/R/epicurve.table.R
epitools/R/oddsratio.fisher.R
epitools/R/or.midp.R
epitools/R/julian2date.R
epitools/R/ormidp.test.R
epitools/R/expand.table.R
epitools/R/colors.matrix.R
epitools/R/epitable.R
epitools/R/colorbrewer.display.R
epitools/R/pois.exact.R
epitools/R/epidate.R
epitools/R/binom.wilson.R
epitools/R/rateratio.R
epitools/R/ratetable.R
epitools/R/colors.plot.R
epitools/R/epicurve.dates.R
epitools/R/colorbrewer.data.R
epitools/R/ageadjust.direct.R
epitools/R/binom.approx.R
epitools/R/rate2by2.test.R
epitools/R/oddsratio.small.R
epitools/R/riskratio.small.R
epitools/NAMESPACE
epitools/data
epitools/data/oswego.rda
epitools/data/wnv.rda
epitools/data/wcgs.rda