BSpgmap: Genetic map data of a RIL population

In eqtl: Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis

Description

Genetic map of physical data of an Arabidopsis~thaliana Recombinant Inbred Line population

Usage

data(BSpgmap)

Format

A data frame with 69 observations on the following 3 variables representing the physical location of genetic markers:

Marker

a factor with genetic marker names as levels.

chr

a numeric vector determining the chromosomes.

PP

a numeric vector determining the markers physical position on the chromosome in base pair (bp).

Details

Physical data of the 33RV population genetic map. This population was created from a Bay0 x Sha cross by Olivier Loudet and Sylvain Chaillou between 1997 and 2000 at INRA Versailles. For complete description of the population see reference below.

Source

Loudet (Genetics and Plant breeding, the VAST lab, INRA VERSAILLES) http://www.inra.fr/vast/

References

Loudet et al.(2002) Theoretical and Applied Genetics, vol 104, pp 1173-1184

Examples

data(BSpgmap);

eqtl documentation built on May 2, 2019, 5:42 a.m.