Sample data from an experiment on the expression level variation in the A.thaliana seed at 10 day after pollination.
An object of class
There are 420 RIL individuals typed at 69 markers and 160 individuals have been retained for phenotyping. The population is the 33RV Versailles RIL population Bay x Sha. See references below. The phenotype is a sample of 500 anonymized Gene Sequence Tags hybridization signals measured on the CATMA microarray. Some probes are not GST. You need to remove them with the
cleanphe function with the parameter
string="MITO". See references below.
Jean-Pierre Renou and Alain Lecharny (CATdb a Complete Arabidopsis Transcriptome database)
Loudet (Genetic and Plant breeding, the VAST lab, INRA VERSAILLES)
Crowe M.L. et al., (2003) CATMA, A complete Arabidopsis GST database. Nucleic Acids Res 31:156-158.
Loudet et al.(2002) Theoretical and Applied Genetics, vol 104, pp 1173-1184
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