data.PAH: The data of metabolic pathway of PAH interaction on oral...

In etma: Epistasis Test in Meta-Analysis

Description

This data used the data from a meta-analysis included about 50 studies investigating the associations between CYP1A1/GSTM1 and oral cancer, and saved the studies both reported the genotype of GSTM1 and CYP1A1 rs4646903. Finally, there are 13 studies included in this data.

Usage

data("data.PAH")

Format

A data frame with 13 observations on the following 11 variables.

Athour

the first author in included studies.

Year

the published year in included studies.

Country

the location of study.

case.CYP1A1.0

the number of AA genotype (rs4646903) in cases.

case.CYP1A1.1

the number of AC/CC genotype (rs4646903) in cases (risk type).

ctrl.CYP1A1.0

the number of AA genotype (rs4646903) in controls.

ctrl.CYP1A1.1

the number of AC/CC genotype (rs4646903) in controls (risk type).

case.GSTM1.0

the number of GSTM1 functional type in cases.

case.GSTM1.1

the number of GSTM1 null type in cases (risk type).

ctrl.GSTM1.0

the number of GSTM1 functional type in controls.

ctrl.GSTM1.1

the number of GSTM1 null type in controls (risk type).

References

Liu H, Jia J, Mao X, Lin Z. (2015) Association of CYP1A1 and GSTM1 Polymorphisms With Oral Cancer Susceptibility: A Meta-Analysis. Medicine 94(27): e895. doi: 10.1097/MD.0000000000000895

See Also

ETMA

Examples

data(data.PAH)
head(data.PAH)

etma documentation built on May 2, 2019, 8:30 a.m.