Files in fastTopics
Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data
MD5
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R
R/sysdata.rda
R/volcano_plots.R
R/fit_poisson_nmf.R
R/init_poisson_nmf.R
R/de_analysis.R
R/other_plots.R
R/merge_topics.R
R/colors.R
R/summary.R
R/pbmc_facs.R
R/poismix.R
R/embedding_plots.R
R/likelihood.R
R/poisson.R
R/multinom2poisson.R
R/predict.R
R/pnmfem.R
R/fit_topic_model.R
R/homer.R
R/misc.R
R/scd.R
R/betanmf.R
R/datasim.R
R/structure_plot.R
R/select.R
R/embeddings.R
R/zzz.R
R/poisson2multinom.R
R/topicscore.R
R/lfc.R
R/ccd.R
R/mixem.R
R/fit_multinom_model.R
R/verify_args.R
src/Makevars.win
src/Makevars
src/RcppExports.cpp
src/poismix.cpp
src/cost.h
src/mixem.h
src/poisson.cpp
src/cost.cpp
src/misc.cpp
src/ccd.cpp
src/misc.h
src/mixem.cpp
src/pnmfem.cpp
src/scd.cpp
src/poismix.h
inst/COPYRIGHTS
inst/CITATION
inst/doc/relationship.html
inst/doc/topics_vs_clusters.R
inst/doc/topics_vs_clusters.Rmd
inst/doc/relationship.Rmd
inst/doc/relationship.R
inst/doc/topics_vs_clusters.html
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test_plots.R
tests/testthat/test_mixem.R
tests/testthat/test_poisson2multinom.R
tests/testthat/test_fit_multinom_model.R
tests/testthat/test_poismix.R
tests/testthat/test_fit_poisson_nmf.R
tests/testthat/test_summary.R
tests/testthat/test_fit_topic_model.R
tests/testthat/test_de_analysis.R
tests/testthat/test_select.R
tests/testthat/test_likelihood.R
tests/testthat/helper_functions.R
vignettes/topics_vs_clusters.Rmd
vignettes/relationship.Rmd
data/pbmc_facs.RData
man/merge_topics.Rd
man/predict.Rd
man/fit_topic_model.Rd
man/fit_poisson_nmf.Rd
man/poisson2multinom.Rd
man/simulate_gene_data.Rd
man/plot_progress.Rd
man/simulate_count_data.Rd
man/compare_fits.Rd
man/fit_multinom_model.Rd
man/volcano_plot.Rd
man/select_loadings.Rd
man/plot_loglik_vs_rank.Rd
man/multinom2poisson.Rd
man/likelihood.Rd
man/embeddings_from_topics.Rd
man/loadings_plot.Rd
man/embedding_plots.Rd
man/summary.poisson_nmf_fit.Rd
man/de_analysis.Rd
man/simulate_toy_gene_data.Rd
man/pbmc_facs.Rd
man/run_homer.Rd
man/structure_plot.Rd
