fit_fb4_binary_search: Fit FB4 model using binary search

In fb4package: 'Fish Bioenergetics 4.0' Model Implementation with High-Performance 'TMB' Backend

Fit FB4 model using binary search

Description

Coordinates the binary search fitting process for weight or consumption targets, then runs a final detailed simulation with the optimal p_value.

Usage

fit_fb4_binary_search(
  target_value,
  fit_type,
  processed_simulation_data,
  oxycal = 13560,
  tolerance = 0.001,
  max_iterations = 25,
  lower_bound = 0.01,
  upper_bound = 5,
  verbose = FALSE
)

Arguments

target_value	Target value to fit
fit_type	Type of fitting ("weight" or "consumption")
processed_simulation_data	Complete processed simulation data
oxycal	Oxycalorific coefficient (J/g O2), default 13560
tolerance	Tolerance for convergence, default 0.001
max_iterations	Maximum number of iterations, default 25
verbose	Whether to show progress messages, default FALSE

Value

List with fitting results and final simulation

fb4package documentation built on May 8, 2026, 1:07 a.m.