summary.fb4_result: Summary Method for fb4_result Objects

In fb4package: 'Fish Bioenergetics 4.0' Model Implementation with High-Performance 'TMB' Backend

Summary Method for fb4_result Objects

Description

Prints the compact print.fb4_result output followed by a detailed section with execution metadata (backend, version, timing) and method-specific diagnostics: optimisation tolerances for traditional methods, statistical details and profile-likelihood availability for MLE, success rate and percentiles for bootstrap, and individual/population parameter distributions for hierarchical fits. Daily output column availability is reported at the end.

Usage

## S3 method for class 'fb4_result'
summary(object, ...)

Arguments

object	fb4_result object
...	Additional arguments (not used)

Value

Invisibly returns the input object

Examples

data(fish4_parameters)
sp   <- fish4_parameters[["Oncorhynchus tshawytscha"]]$life_stages$adult
info <- fish4_parameters[["Oncorhynchus tshawytscha"]]$species_info
bio  <- Bioenergetic(
  species_params     = sp,
  species_info       = info,
  environmental_data = list(
    temperature = data.frame(Day = 1:30, Temperature = rep(12, 30))
  ),
  diet_data = list(
    proportions = data.frame(Day = 1:30, Prey1 = 1.0),
    energies    = data.frame(Day = 1:30, Prey1 = 5000),
    prey_names  = "Prey1"
  ),
  simulation_settings = list(initial_weight = 100, duration = 30)
)
bio$species_params$predator$ED_ini <- 5000
bio$species_params$predator$ED_end <- 5500
result <- run_fb4(bio, strategy = "direct", p_value = 0.5, verbose = FALSE)
summary(result)

fb4package documentation built on May 8, 2026, 1:07 a.m.