FamiliasLocus: FamiliasLocus: a function for reading Familias locus data.

FamiliasLocusR Documentation

FamiliasLocus: a function for reading Familias locus data.

Description

FamiliasLocus: a function for reading Familias locus data.

Usage

FamiliasLocus(
  frequencies,
  allelenames,
  name,
  MutationModel = "Stepwise",
  MutationRate = 0,
  MutationRange = 0.5,
  MutationRate2 = 0,
  MutationMatrix,
  Stabilization = "None",
  MaxStabilizedMutrate = 1,
  femaleMutationModel,
  femaleMutationRate,
  femaleMutationRange,
  femaleMutationRate2,
  femaleMutationMatrix,
  maleMutationModel,
  maleMutationRate,
  maleMutationRange,
  maleMutationRate2,
  maleMutationMatrix
)

Arguments

frequencies

allele frequencies

allelenames

names

name

system name

MutationModel

model

MutationRate

rates

MutationRange

range

MutationRate2

rate two, applied for extended stepwise

MutationMatrix

matrix

Stabilization

stabilization factor

MaxStabilizedMutrate

mix factor

femaleMutationModel

for females

femaleMutationRate

rate

femaleMutationRange

range

femaleMutationRate2

rate 2

femaleMutationMatrix

females matrix

maleMutationModel

male matrix

maleMutationRate

male rate

maleMutationRange

male range

maleMutationRate2

rate 2

maleMutationMatrix

matrix

Value

Locus analysis.

Examples

frequencies <- c(0.1, 0.2, 0.3, 0.4)
allelenames <- c("A", "B", "C", "D")
marker <- FamiliasLocus(frequencies, allelenames)

fbnet documentation built on July 9, 2023, 6:24 p.m.