mallard: Data from Silverman et al. (2018) Microbiome
In fido: Bayesian Multinomial Logistic Normal Regression
mallard R Documentation
Data from Silverman et al. (2018) Microbiome
Description
High Resolution (hourly and daily) sampling of 4 in vitro artificial gut models
with many technical replicates to identify technical variation.
Usage
data(mallard)
Format
A list containing "otu_table", "sample_data", "tax_table", and "refseq".
Details
This data is at the sequence variant level. Data at the family level
processed as in Silverman et al. 2018 is given in mallard_family
References
Silverman et al. "Dynamic linear models guide design and
analysis of microbiota studies within artificial human guts".
Microbiome 2018 6:202
fido documentation built on June 22, 2024, 9:36 a.m.
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| mallard | R Documentation |
Data from Silverman et al. (2018) Microbiome
Description
High Resolution (hourly and daily) sampling of 4 in vitro artificial gut models with many technical replicates to identify technical variation.
Usage
data(mallard)
Format
A list containing "otu_table", "sample_data", "tax_table", and "refseq".
Details
This data is at the sequence variant level. Data at the family level
processed as in Silverman et al. 2018 is given in mallard_family
References
Silverman et al. "Dynamic linear models guide design and analysis of microbiota studies within artificial human guts". Microbiome 2018 6:202
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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