mallard_family: Data from Silverman et al. (2018) Microbiome
In fido: Bayesian Multinomial Logistic Normal Regression
mallard_family R Documentation
Data from Silverman et al. (2018) Microbiome
Description
High Resolution (hourly and daily) sampling of 4 in vitro artificial gut models
with many technical replicates to identify technical variation.
Usage
data(mallard_family)
Format
A list containing "otu_table", "sample_data", "tax_table", and "refseq".
Details
This data is at the family level and processed as in Silverman et al. 2018. Data at the sequence
variant level without preprocessing is given in mallard
References
Silverman et al. "Dynamic linear models guide design and
analysis of microbiota studies within artificial human guts".
Microbiome 2018 6:202
fido documentation built on June 22, 2024, 9:36 a.m.
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| mallard_family | R Documentation |
Data from Silverman et al. (2018) Microbiome
Description
High Resolution (hourly and daily) sampling of 4 in vitro artificial gut models with many technical replicates to identify technical variation.
Usage
data(mallard_family)
Format
A list containing "otu_table", "sample_data", "tax_table", and "refseq".
Details
This data is at the family level and processed as in Silverman et al. 2018. Data at the sequence
variant level without preprocessing is given in mallard
References
Silverman et al. "Dynamic linear models guide design and analysis of microbiota studies within artificial human guts". Microbiome 2018 6:202
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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