flan: FLuctuation ANalysis on Mutation Models

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Tools for fluctuations analysis of mutant cells counts.

Author
Adrien Mazoyer [aut, cre], Remy Drouilhet [aut], Stephane Despreaux [aut], Bernard Ycart [aut]
Date of publication
2016-09-22 16:50:59
Maintainer
Adrien Mazoyer <Adrien.Mazoyer@imag.fr>
License
GPL
Version
0.3
URLs

View on CRAN

Man pages

boeal
Number of nalidixic acid-resistant mutants from Boe et al....
david
Mutant counts and final numbers from H. L. David (1970)
draw.clone
Graphic representation of clone growing upon a finite time.
flan-package
Fluctuation analysis of mutant cell counts
flan.test
Fluctuation Analysis parametric testing
luriadel
Resistant bacteria counts from Luria and Delbruck (1943)
mutestim
Fluctuation Analysis parametric estimation
rflan
The distribution of mutant cell counts
roster
Mutant counts from Rosche and Foster (2000)
werhoff
Rifampin-resistant mutant counts from Werngren and Hoffner...

Files in this package

flan
flan/src
flan/src/rcpp_flan_module.cpp
flan/src/FLAN_Clone.h
flan/src/MATH_Function.h
flan/src/MATH_Function.cpp
flan/src/FLAN_Clone.cpp
flan/src/FLAN_Sim.h
flan/src/FLAN_MutationModel.h
flan/src/FLAN_MutationModel.cpp
flan/src/FLAN_Sim.cpp
flan/src/rcpp_flan_module.h
flan/NAMESPACE
flan/data
flan/data/luriadel.RData
flan/data/boeal.RData
flan/data/werhoff.RData
flan/data/roster.RData
flan/data/datalist
flan/data/david.RData
flan/R
flan/R/zzz.R
flan/R/flan.R
flan/MD5
flan/DESCRIPTION
flan/man
flan/man/flan-package.Rd
flan/man/roster.Rd
flan/man/luriadel.Rd
flan/man/david.Rd
flan/man/werhoff.Rd
flan/man/mutestim.Rd
flan/man/rflan.Rd
flan/man/flan.test.Rd
flan/man/boeal.Rd
flan/man/draw.clone.Rd