roster: Mutant counts from Rosche and Foster (2000)

In flan: FLuctuation ANalysis on Mutation Models

Description

Sample from Table 3 of Rosche and Foster (2000).

Usage

  data(roster)

Format

A vector of positive integers with size 52.

Source

W. A. Rosche and P. L. Foster, Determining mutation rates in bacterial populations, Methods, 20(1):4-17 (2000)

Examples

# are parameters significantly larger than 1 ?
flan.test(roster,alternative="greater",mutations0=1,fitness0=1)

Example output

	One sample ML-test (LD model)

--------------------------------- Data -------------------------------
data:  roster
Sample parameters: death = 0, plateff = 1
------------------------------ Statistics ----------------------------
Tstat = (1.7725 , 1.8599)
p-value for mutation number  =  0.03816 
p-value for fitness  =  0.03145 
Alternative hypotheses: true mutation number is greater than 1
                        true fitness is greater than 1
95 percent confidence interval for mutation number: 
1.029207        Inf
95 percent confidence interval for fitness: 
1.310725        Inf
Sample estimates: 
mutation number         fitness 
       1.405604        3.687747 

flan documentation built on June 7, 2021, 9:07 a.m.