plot.fG_osar: plot

In foieGras: Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour

Description

plot One-Step-Ahead (prediction) residuals from a foieGras osar object

Usage

## S3 method for class 'fG_osar'
plot(
  x,
  type = c("ts", "qqnorm", "acf"),
  pages = 1,
  ncol = 1,
  ask = TRUE,
  pal = "Zissou1",
  ...
)

Arguments

x	a foieGras osar object with class fG_osar
type	type of residual plot to generate; time-series (ts), qqnorm (qq; default) or acf (note: hist is deprecated)
pages	plots of all individuals on a single page (pages = 1; default) or each individual on a separate page (pages = 0)
ncol	number of columns to use for faceting. Default is ncol = 2 but this may be increased for multi-individual fit objects
ask	logical; if TRUE (default) user is asked for input before each plot is rendered. set to FALSE to return ggplot objects
pal	hcl.colors colour palette to use (default = "Zissou1"; type hcl.pals() for options)
...	additional arguments to be ignored

Examples

## generate a fG_ssm fit object (call is for speed only)
xs <- fit_ssm(sese2, spdf=FALSE, model = "rw", time.step=72, 
control = ssm_control(se = FALSE, verbose = 0))

dres <- osar(xs[2, ]) # only use one seal to save time
plot(dres, type = "qq")

foieGras documentation built on April 27, 2021, 1:05 a.m.