| ace | Abundance- and Incidence-based Coverage Estimators |
| aic.nest | Nestedness of samples using AIC |
| bootstrap | Bootstrap Species Richness Estimator |
| bray.curtis | Similarity/Dissimilarity Indices |
| chao1 | Chao's Species Estimators |
| chao.sd | Chao's estimation of standard error |
| chao.sorenson | Chao's Jaccard and Sorenson Estimators of Shared Species |
| coi | Cohesiveness Index for Relational Clustering |
| create.lats | Creating a table of Latitudes and Longitudes |
| create.matrix | Creating species locality matrices |
| deg.dist | Haversine Distance Formula |
| dino.dist | Creating a Distance Matrix |
| dino.mst | Calculate a Minimum Spanning Tree or Network |
| earth.bear | Bearings Between Geographic Locations |
| earth.dist | Calculating Geographic Distances |
| earth.poly | Calculating a Minimum Convex Polygon |
| earth.tri | Calculating the Surface Area Enclosed by Three Geographic... |
| euler.rot | Calculate the Euler Rotation of a Point |
| fdata | A Sample Species Abundance Dataset |
| fossil-package | fossil: Palaeoecological and Palaeogeographical Analysis... |
| int.chao | Internal function for chao estimators |
| jack1 | First- and second-order jacknife estimators |
| lats2Shape | Converting a Table of Latitudes and Longitudes to a Shapefile |
| localoptima | Function to Find Local Optimization for clustering |
| loc.map | Mapping Points on a Global Map |
| msn2Shape | Convert a Minimum spanning Network or Tree to Shapefile |
| msn.map | Mapping a Minimum Spanning Tree |
| mstlines | Display a Minimum Spanning Tree or Network |
| new.lat.long | Find a New Latitude and Longitude |
| nmds.mst | Creating NMDS plots with overlain Minimum Spanning Trees |
| rand.index | Rand Index and Adjusted Rand Index |
| rclust | Relational Clustering |
| rclust.dist | Relational Clustering |
| rclust.null | Relational Clustering |
| rclust.weights | Relational Clustering |
| relational.clustering | Relational Clustering |
| sac | Calculate Species Area Curves |
| sim.occ | Simulated Species Occurrence data |
| spp.est | Estimating Species Diversity |
| tri.ineq | Testing for the Triangle Inequality |
