mesh.atlas.file.paths: Get the file paths of a mesh atlas for a subject.

In fsbrain: Managing and Visualizing Brain Surface Data

Get the file paths of a mesh atlas for a subject.

Description

Compute the paths of the surface mesh and annotation files of a mesh atlas. The files are not required to exist, see mesh.atlas.check.files.

Usage

mesh.atlas.file.paths(subjects_dir, subject_id, atlas, surface)

Arguments

subjects_dir	string. The FreeSurfer SUBJECTS_DIR, i.e., a directory containing the data for all your subjects, each in a subdir named after the subject identifier.
subject_id	string. The subject identifier.
atlas	string. The atlas name, used to construct the annotation file name.
surface	string. The name of the surface mesh that belongs to the atlas.

Value

vector of strings, the file paths of the atlas files.

fsbrain documentation built on Sept. 27, 2026, 1:07 a.m.