autoplot.multiFunData: Visualize multivariate functional data objects using ggplot

In funData: An S4 Class for Functional Data

Visualize multivariate functional data objects using ggplot

Description

This function allows to plot multiFunData objects based on the ggplot2 package. The function applies the autoplot.funData function to each element and returns either a combined plot with all elements plotted in one row or a list containing the different subplots as ggplot objects. The individual objects can be customized using all functionalities of the ggplot2 package.

Usage

autoplot.multiFunData(
  object,
  obs = seq_len(nObs(object)),
  dim = seq_len(length(object)),
  plotGrid = FALSE,
  ...
)

Arguments

object	A multiFunData object that is to be plotted.
obs	A vector of numerics giving the observations to plot. Defaults to all observations in object. For two-dimensional functions (images) obs must have length 1.
dim	The dimensions to plot. Defaults to length(object), i.e. all functions in object are plotted.
plotGrid	Logical. If TRUE, the data is plotted using grid.arrange and the list of ggplot objects is returned invisibly. If FALSE, only the list of objects is returned. Defaults to FALSE.
...	Further parameters passed to the univariate autoplot.funData functions for funData objects.

Value

A list of ggplot objects that are also printed directly as a grid if plotGrid = TRUE.

Warning

Currently, the function does not accept different parameters for the univariate elements.

See Also

multiFunData, ggplot, plot.multiFunData

Examples

# Load packages ggplot2 and gridExtra before running the examples
library("ggplot2"); library("gridExtra")

# One-dimensional elements
argvals <- seq(0, 2*pi, 0.01)
f1 <- funData(argvals, outer(seq(0.75, 1.25, length.out = 11), sin(argvals)))
f2 <- funData(argvals, outer(seq(0.75, 1.25, length.out = 11), cos(argvals)))

m1 <- multiFunData(f1, f2)

g <- autoplot(m1) # default
g[[1]] # plot first element
g[[2]] # plot second element
gridExtra::grid.arrange(grobs = g, nrow = 1) # requires gridExtra package

autoplot(m1, plotGrid = TRUE) # the same directly with plotGrid = TRUE


# Mixed-dimensional elements
X <- array(0, dim = c(11, length(argvals), length(argvals)))
X[1,,] <- outer(argvals, argvals, function(x,y){sin((x-pi)^2 + (y-pi)^2)})
f2 <- funData(list(argvals, argvals), X)

m2 <- multiFunData(f1, f2)

autoplot(m2, obs = 1, plotGrid = TRUE)

# Customizing plots (see ggplot2 documentation for more details)
g2 <- autoplot(m2, obs = 1)
g2[[1]] <- g2[[1]] + ggtitle("First element") + theme_bw()
g2[[2]] <- g2[[2]] + ggtitle("Second element") + 
                     scale_fill_gradient(high = "green", low = "blue")
gridExtra::grid.arrange(grobs = g2, nrow = 1) # requires gridExtra package

funData documentation built on May 29, 2024, 6:08 a.m.