This is a data set of copy number variation data with n=500 observations and p=1000 features. The length n
batch vector (first column of
caseDat) indicates the batch for each sample.
A list with two objects:
A numeric vector indicating batch for the n=500 samples.
A matrix of n=500 samples and p=1000 features.
Reese, S. E., Archer, K. J., Therneau, T. M., Atkinson, E. J., Vachon, C. M., de Andrade, M., Kocher, J. A., and Eckel-Passow, J. E. A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal components analysis. Bioinformatics, (in review).
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