Files in galamm
Generalized Additive Latent and Mixed Models
MD5
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/srr-stats-standards.R
R/residuals.galamm.R
R/plot_smooth.R
R/fitted.galamm.R
R/logLik.galamm.R
R/data.R
R/factor_loadings.R
R/VarCorr.R
R/summary.galamm.R
R/sigma.R
R/vcov.R
R/galamm_control.R
R/galamm.R
R/ranef.R
R/misc.R
R/galamm-package.R
R/confint.R
R/response.R
R/coef.R
R/extract_optim_parameters.R
R/define_factor_mappings.R
R/mgcv-functions.R
R/gamm4-functions.R
R/fixef.R
R/plot.galamm.R
R/smooths.R
R/anova.galamm.R
R/predict.galamm.R
R/family.R
R/formula.R
src/Makevars.win
src/Makevars
src/compute_galamm.cpp
src/RcppExports.cpp
src/model.h
src/data.h
src/misc.h
src/parameters.h
src/update_funs.h
inst/REFERENCES.bib
inst/CITATION
inst/include/autodiff/forward/real.hpp
inst/include/autodiff/forward/dual.hpp
inst/include/autodiff/forward/dual/dual.hpp
inst/include/autodiff/forward/dual/eigen.hpp
inst/include/autodiff/forward/real/real.hpp
inst/include/autodiff/forward/real/eigen.hpp
inst/include/autodiff/forward/utils/gradient.hpp
inst/include/autodiff/forward/utils/taylorseries.hpp
inst/include/autodiff/forward/utils/derivative.hpp
inst/include/autodiff/common/meta.hpp
inst/include/autodiff/common/classtraits.hpp
inst/include/autodiff/common/numbertraits.hpp
inst/include/autodiff/common/binomialcoefficient.hpp
inst/include/autodiff/common/vectortraits.hpp
inst/include/autodiff/common/eigen.hpp
inst/include/autodiff/reverse/var.hpp
inst/include/autodiff/reverse/var/var.hpp
inst/include/autodiff/reverse/var/eigen.hpp
inst/doc/latent_observed_interaction.html
inst/doc/glmm_factor.Rmd
inst/doc/lmm_factor.Rmd
inst/doc/optimization.Rmd
inst/doc/lmm_heteroscedastic.html
inst/doc/optimization.html
inst/doc/galamm.html
inst/doc/lmm_factor.html
inst/doc/semiparametric.html
inst/doc/lmm_heteroscedastic.Rmd
inst/doc/galamm.R
inst/doc/mixed_response.Rmd
inst/doc/glmm_factor.html
inst/doc/scaling.Rmd
inst/doc/semiparametric.Rmd
inst/doc/scaling.html
inst/doc/galamm.Rmd
inst/doc/latent_observed_interaction.Rmd
inst/doc/mixed_response.html
inst/testdata/test_multiple_factors.rds
inst/figures/galamm.png
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-galamm-setup.R
tests/testthat/test-galamm-glmm.R
tests/testthat/test-misc.R
tests/testthat/test-galamm-mixed-resp.R
tests/testthat/test-galamm-heteroscedastic.R
tests/testthat/test-galamm-semiparametric.R
tests/testthat/test-parameter-recovery.R
tests/testthat/Rplots.pdf
tests/testthat/test-galamm-lmm.R
tests/testthat/test-galamm-latent-covariates-interaction.R
tests/testthat/_snaps/galamm-latent-covariates-interaction.md
tests/testthat/_snaps/galamm-heteroscedastic.md
tests/testthat/_snaps/galamm-glmm.md
tests/testthat/_snaps/galamm-setup.md
tests/testthat/_snaps/galamm-mixed-resp.md
tests/testthat/_snaps/galamm-semiparametric.md
tests/testthat/_snaps/galamm-lmm.md
vignettes/latent-observed-smooth-1.png
vignettes/scaling-glmm-plot-1.png
vignettes/glmm_factor.Rmd
vignettes/lmm_factor.Rmd
vignettes/semiparametric-mixed-by-factor1-1.png
vignettes/semiparametric-gaussian-gamm4-smooth-1.png
vignettes/glmm_factor_binomial_diagnostic-1.png
vignettes/optimization.Rmd
vignettes/semiparametric-gaussian-gamm-diagnostic-1.png
vignettes/scaling-semiparametric-binomial-plot-1.png
vignettes/semiparametric-gaussian-gamm4-diagnostic-1.png
vignettes/semiparametric-gaussian-by-factor1-1.png
vignettes/semiparametric-mixedresponse-smooths3-1.png
vignettes/semiparametric-multivariate-spaghetti-1.png
vignettes/glmm_factor_poisson_diagnostic-1.png
vignettes/semiparametric-multivariate-gaussian-smooth1-1.png
vignettes/scaling-semiparametric-gaussian-plot-1.png
vignettes/semiparametric-gamm4-binomial-1.png
vignettes/semiparametric-gaussian-gamm-smooth2-2.png
vignettes/semiparametric-gaussian-gamm-smooth2-1.png
vignettes/semiparametric-gaussian-factor-1.png
vignettes/lmm_heteroscedastic.Rmd
vignettes/semiparametric-gaussian-gamm-smooth1-1.png
vignettes/semiparametric-multivariate-gaussian-smooth2-1.png
vignettes/mixed_response.Rmd
vignettes/scaling.Rmd
vignettes/semiparametric-spaghetti-plot-1.png
vignettes/lmm_factor_diagnostic_plot-1.png
vignettes/scaling-hsced-plot-1.png
vignettes/lmm_heteroscedastic_diagnostic-1.png
vignettes/semiparametric.Rmd
vignettes/semiparametric-mixedresponse-smooths2-1.png
vignettes/scaling-lmm-plot-1.png
vignettes/glmm_factor_poisson_diagnostic_lme4-1.png
vignettes/semiparametric-gaussian-by-factor2-1.png
vignettes/semiparametric-mixedresponse-smooths1-1.png
vignettes/galamm.Rmd
vignettes/latent_observed_interaction.Rmd
vignettes/semiparametric-mixed-by-factor2-1.png
vignettes/semiparametric-gamm-binomial-1.png
data/latent_covariates.rda
data/latent_covariates_long.rda
data/mresp_hsced.rda
data/epilep.rda
data/lifespan.rda
data/cognition.rda
data/mresp.rda
data/hsced.rda
data/diet.rda
man/lifespan.Rd
man/galamm-package.Rd
man/confint.galamm.Rd
man/hsced.Rd
man/family.galamm.Rd
man/factor_loadings.galamm.Rd
man/latent_covariates.Rd
man/logLik.galamm.Rd
man/latent_covariates_long.Rd
man/galamm_control.Rd
man/epilep.Rd
man/ranef.galamm.Rd
man/VarCorr.Rd
man/deviance.galamm.Rd
man/print.summary.galamm.Rd
man/predict.galamm.Rd
man/vcov.galamm.Rd
man/cognition.Rd
man/fitted.galamm.Rd
man/residuals.galamm.Rd
man/extract_optim_parameters.galamm.Rd
man/llikAIC.Rd
man/sigma.galamm.Rd
man/response.Rd
man/galamm.Rd
man/plot_smooth.galamm.Rd
man/mresp_hsced.Rd
man/formula.galamm.Rd
man/nobs.galamm.Rd
man/plot.galamm.Rd
man/t2l.Rd
man/mresp.Rd
man/print.galamm.Rd
man/summary.galamm.Rd
man/anova.galamm.Rd
man/coef.galamm.Rd
man/fixef.Rd
man/print.VarCorr.galamm.Rd
man/sl.Rd
man/diet.Rd
man/figures/logo.png
man/figures/README-unnamed-chunk-10-1.png
man/figures/README-unnamed-chunk-9-1.png
man/figures/README-pressure-1.png
