| basic_info | Allele and genotype frequencies |
| clean_workdir | Removing files created by Genepop |
| Contingency-test | Exact test on a single contingency table |
| conversion | File conversions |
| Differentiation | Tests of genic and genotypic differentiation |
| Fst | Fst (or rho_ST) estimation |
| genedivFis | Gene diversities and Fis (or rho_IS) |
| genepopExample | Copy an example file from the Genepop package distribution |
| genepop-internals | Internal genepop Functions |
| genepop-package | Population genetic analyses using the Genepop software |
| genepop-utils | Programming utilities |
| GUI | Call an experimental GUI for Genepop |
| Hardy-Weinberg | Tests of Hardy-Weinberg genotypic proportions |
| IBD | Isolation by distance |
| Linkage | Tables and exact test for genotypic linkage disequilibrium |
| manipulation | Various data manipulation utilities |
| Nm_private | Private allele method |
| nulls | Estimation of allele frequencies under genotyping failure. |
| setMantelSeed | Set random generator seed for Mantel test |
| setRandomSeed | Set random generator seed (except for Mantel test) |
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