BRCA1_splice_variants: BRCA1 Splice Variants

In geneviewer: Gene Cluster Visualizations

BRCA1 Splice Variants

Description

This dataset contains detailed information on five different splice variants of the BRCA1 gene. It includes data on the types of transcript features (exon, intron, UTR), chromosomal positions, strand orientations, and transcript lengths.

Usage

BRCA1_splice_variants

Format

A data frame with 119 observations and 6 variables:

ensembl_transcript_id

Unique Ensembl transcript identifiers. A character vector.

type

Type of the transcript feature, indicating whether it is an "exon", or "UTR". A character vector.

start

The start position of the feature on the chromosome. A numeric vector.

end

The end position of the feature on the chromosome. A numeric vector.

strand

The strand orientation of the feature, with -1 indicating the reverse strand. An integer vector.

transcript_length

The total length of the transcript in base pairs. An integer vector.

Source

Derived from the Ensembl website

geneviewer documentation built on April 12, 2025, 9:12 a.m.