GeoNetwork-class: GeoNetwork

In geohabnet: Geographical Risk Analysis Based on Habitat Connectivity

GeoNetwork

Description

An S4 class object with the multiple components resulting from a geographical habitat network analysis. The GeoNetwork object will wrap all the results from the habitat connectivity analysis using sean() or sensitivity_analysis(). Specifically, this class contains the field from Gmap class, which has results of the habitat connectivity analysis in the form of SpatRaster and TIFF file.

Usage

## S4 replacement method for signature 'GeoNetwork'
habitat_density(x) <- value

Arguments

x	GeoNetwork.
value	SpatRaster.

Value

GeoNetwork.

Slots

rasters

A list of GeoRasters objects.

habitat_density

A SpatRaster representing the habitat availability (or simply host density) that was used as input in the habitat connectivity analysis.

me_rast

A SpatRaster representing the mean habitat connectivity of a region. The mean is calculated based on a sensitivity analysis across the user-specified dispersal parameters.

me_out

Character. A file path to where the mean habitat connectivity raster is saved.

diff_rast

A SpatRaster representing the difference in ranks between the mean habitat connectivity and the user-supplied map of habitat availability.

diff_out

Character. A file path to where the difference raster is saved.

var_rast

A SpatRaster representing the variance in habitat connectivity in a region. The variance is calculated based on a sensitivity analysis across the user-specified dispersal parameters.

var_out

Character. A file path to where the variance raster is saved.

geohabnet documentation built on May 26, 2026, 9:06 a.m.