Nothing
tests/testthat/_snaps/print_test_predictions.md
In ggeffects: Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
print hypothesis_test simple contrast link scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
------------------------------------------
0-1 | -0.07 | -1.19, 1.05 | 0.901
Message
Contrasts are presented as log-odds.
print hypothesis_test simple predictions link scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
--------------------------------------------
0 | -1.14 | -2.06, -0.22 | 0.015
1 | -1.07 | -2.24, 0.11 | 0.076
Message
Predictions are presented as log-odds.
print hypothesis_test simple contrast exp scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
-----------------------------------------
0-1 | 0.99 | 0.80, 1.22 | 0.902
Message
Contrasts are presented on the exponentiated scale.
print hypothesis_test simple contrast odds ratio scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
-----------------------------------------
0-1 | 0.93 | 0.30, 2.86 | 0.901
Message
Contrasts are presented as odds ratios.
print hypothesis_test simple contrast response scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
------------------------------------------
0-1 | -0.01 | -0.22, 0.20 | 0.902
Message
Contrasts are presented as probabilities (in %-points).
print hypothesis_test simple predictions exp scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
------------------------------------------
0 | 1.27 | 1.08, 1.51 | 0.005
1 | 1.29 | 1.03, 1.62 | 0.025
Message
Predictions are presented on the exponentiated scale.
print hypothesis_test simple predictions odds ratio scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
------------------------------------------
0 | 0.32 | 0.13, 0.80 | 0.015
1 | 0.34 | 0.11, 1.12 | 0.076
Message
Predictions are presented as odds ratios.
print hypothesis_test contrasts link scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
--------------------------------------------------------
0-1 | 2.48-2.48 | -0.37 | -1.91, 1.18 | 0.644
0-0 | 2.48-9.25 | -0.12 | -0.60, 0.35 | 0.610
0-1 | 2.48-9.25 | -0.19 | -1.43, 1.04 | 0.758
0-0 | 2.48-16.02 | -0.25 | -1.19, 0.70 | 0.610
0-1 | 2.48-16.02 | -0.02 | -1.86, 1.82 | 0.980
1-0 | 2.48-9.25 | 0.24 | -1.21, 1.70 | 0.745
1-1 | 2.48-9.25 | 0.17 | -1.00, 1.34 | 0.774
1-0 | 2.48-16.02 | 0.12 | -1.39, 1.63 | 0.878
1-1 | 2.48-16.02 | 0.34 | -1.99, 2.68 | 0.774
0-1 | 9.25-9.25 | -0.07 | -1.19, 1.05 | 0.901
0-0 | 9.25-16.02 | -0.12 | -0.60, 0.35 | 0.610
0-1 | 9.25-16.02 | 0.10 | -1.67, 1.87 | 0.912
1-0 | 9.25-16.02 | -0.05 | -1.25, 1.14 | 0.932
1-1 | 9.25-16.02 | 0.17 | -1.00, 1.34 | 0.774
0-1 | 16.02-16.02 | 0.22 | -1.59, 2.04 | 0.810
Message
Contrasts are presented as log-odds.
print hypothesis_test predictions link scale
Code
print(out)
Output
var_binom | var_cont | Predicted | 95% CI | p
-------------------------------------------------------
0 | 2.48 | -1.26 | -2.33, -0.19 | 0.021
1 | 2.48 | -0.90 | -2.39, 0.60 | 0.240
0 | 9.25 | -1.14 | -2.06, -0.22 | 0.015
1 | 9.25 | -1.07 | -2.25, 0.11 | 0.076
0 | 16.02 | -1.02 | -2.01, -0.02 | 0.046
1 | 16.02 | -1.24 | -3.04, 0.57 | 0.179
Message
Predictions are presented as log-odds.
print hypothesis_test contrasts exp scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
-------------------------------------------------------
0-1 | 2.48-2.48 | 0.93 | 0.69, 1.27 | 0.658
0-0 | 2.48-9.25 | 0.98 | 0.90, 1.06 | 0.596
0-1 | 2.48-9.25 | 0.97 | 0.77, 1.21 | 0.760
0-0 | 2.48-16.02 | 0.96 | 0.80, 1.14 | 0.608
0-1 | 2.48-16.02 | 1.00 | 0.72, 1.37 | 0.980
1-0 | 2.48-9.25 | 1.05 | 0.78, 1.41 | 0.754
1-1 | 2.48-9.25 | 1.03 | 0.82, 1.31 | 0.780
1-0 | 2.48-16.02 | 1.02 | 0.75, 1.39 | 0.880
1-1 | 2.48-16.02 | 1.07 | 0.69, 1.65 | 0.771
0-1 | 9.25-9.25 | 0.99 | 0.80, 1.22 | 0.902
0-0 | 9.25-16.02 | 0.98 | 0.89, 1.07 | 0.619
0-1 | 9.25-16.02 | 1.02 | 0.75, 1.39 | 0.910
1-0 | 9.25-16.02 | 0.99 | 0.79, 1.25 | 0.932
1-1 | 9.25-16.02 | 1.03 | 0.84, 1.26 | 0.761
0-1 | 16.02-16.02 | 1.04 | 0.75, 1.44 | 0.803
Message
Contrasts are presented on the exponentiated scale.
print hypothesis_test contrasts response scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
--------------------------------------------------------
0-1 | 2.48-2.48 | -0.07 | -0.38, 0.24 | 0.658
0-0 | 2.48-9.25 | -0.02 | -0.10, 0.06 | 0.596
0-1 | 2.48-9.25 | -0.04 | -0.26, 0.19 | 0.760
0-0 | 2.48-16.02 | -0.05 | -0.22, 0.13 | 0.608
0-1 | 2.48-16.02 | 0.00 | -0.32, 0.32 | 0.980
1-0 | 2.48-9.25 | 0.05 | -0.25, 0.34 | 0.754
1-1 | 2.48-9.25 | 0.03 | -0.20, 0.27 | 0.780
1-0 | 2.48-16.02 | 0.02 | -0.28, 0.33 | 0.880
1-1 | 2.48-16.02 | 0.06 | -0.37, 0.50 | 0.771
0-1 | 9.25-9.25 | -0.01 | -0.22, 0.20 | 0.902
0-0 | 9.25-16.02 | -0.02 | -0.12, 0.07 | 0.619
0-1 | 9.25-16.02 | 0.02 | -0.29, 0.33 | 0.910
1-0 | 9.25-16.02 | -0.01 | -0.24, 0.22 | 0.932
1-1 | 9.25-16.02 | 0.03 | -0.17, 0.23 | 0.761
0-1 | 16.02-16.02 | 0.04 | -0.28, 0.36 | 0.803
Message
Contrasts are presented as probabilities (in %-points).
print hypothesis_test predictions exp scale
Code
print(out)
Output
var_binom | var_cont | Predicted | 95% CI | p
-----------------------------------------------------
0 | 2.48 | 1.25 | 1.04, 1.50 | 0.019
1 | 2.48 | 1.34 | 0.98, 1.82 | 0.065
0 | 9.25 | 1.27 | 1.08, 1.51 | 0.005
1 | 9.25 | 1.29 | 1.03, 1.62 | 0.025
0 | 16.02 | 1.30 | 1.07, 1.59 | 0.007
1 | 16.02 | 1.25 | 0.91, 1.71 | 0.161
Message
Predictions are presented on the exponentiated scale.
print hypothesis_test comma and dash levels
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
------------------------------------------------------------------------------
and, another, comma-and, another, comma | a-b | 0.02 | -0.12, 0.16 | 0.796
and, another, comma-no comma | a-a | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-no comma | a-b | -0.13 | -0.36, 0.10 | 0.255
and, another, comma-with, comma | a-a | -0.07 | -0.24, 0.09 | 0.380
and, another, comma-with, comma | a-b | -0.06 | -0.27, 0.16 | 0.610
and, another, comma-no comma | b-a | -0.17 | -0.40, 0.06 | 0.147
and, another, comma-no comma | b-b | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-with, comma | b-a | -0.09 | -0.32, 0.13 | 0.412
and, another, comma-with, comma | b-b | -0.07 | -0.24, 0.09 | 0.380
no comma-no comma | a-b | 0.02 | -0.12, 0.16 | 0.796
no comma-with, comma | a-a | 0.08 | -0.10, 0.26 | 0.402
no comma-with, comma | a-b | 0.10 | -0.13, 0.32 | 0.407
no comma-with, comma | b-a | 0.06 | -0.18, 0.29 | 0.625
no comma-with, comma | b-b | 0.08 | -0.10, 0.26 | 0.402
with, comma-with, comma | a-b | 0.02 | -0.12, 0.16 | 0.796
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
--------------------------------------------------------------------------------------------------
and, another, comma-and, another, comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
and, another, comma-no comma | comma, here-comma, here | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-no comma | comma, here-nothere | -0.13 | -0.36, 0.10 | 0.255
and, another, comma-with, comma | comma, here-comma, here | -0.07 | -0.24, 0.09 | 0.380
and, another, comma-with, comma | comma, here-nothere | -0.06 | -0.27, 0.16 | 0.610
and, another, comma-no comma | nothere-comma, here | -0.17 | -0.40, 0.06 | 0.147
and, another, comma-no comma | nothere-nothere | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-with, comma | nothere-comma, here | -0.09 | -0.32, 0.13 | 0.412
and, another, comma-with, comma | nothere-nothere | -0.07 | -0.24, 0.09 | 0.380
no comma-no comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
no comma-with, comma | comma, here-comma, here | 0.08 | -0.10, 0.26 | 0.402
no comma-with, comma | comma, here-nothere | 0.10 | -0.13, 0.32 | 0.407
no comma-with, comma | nothere-comma, here | 0.06 | -0.18, 0.29 | 0.625
no comma-with, comma | nothere-nothere | 0.08 | -0.10, 0.26 | 0.402
with, comma-with, comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
------------------------------------------------------------------------------
and-dash | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
and-dash-no dash | comma, here | -0.15 | -0.33, 0.03 | 0.099
and-dash-no dash | comma, here-dash-there | -0.13 | -0.36, 0.10 | 0.255
and-dash-with, comma | comma, here | -0.07 | -0.24, 0.09 | 0.380
and-dash-with, comma | comma, here-dash-there | -0.06 | -0.27, 0.16 | 0.610
and-dash-no dash | dash-there-comma, here | -0.17 | -0.40, 0.06 | 0.147
and-dash-no dash | dash-there | -0.15 | -0.33, 0.03 | 0.099
and-dash-with, comma | dash-there-comma, here | -0.09 | -0.32, 0.13 | 0.412
and-dash-with, comma | dash-there | -0.07 | -0.24, 0.09 | 0.380
no dash | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
no dash-with, comma | comma, here | 0.08 | -0.10, 0.26 | 0.402
no dash-with, comma | comma, here-dash-there | 0.10 | -0.13, 0.32 | 0.407
no dash-with, comma | dash-there-comma, here | 0.06 | -0.18, 0.29 | 0.625
no dash-with, comma | dash-there | 0.08 | -0.10, 0.26 | 0.402
with, comma | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
print hypothesis_test collapse levels
Code
print(out)
Output
# Pairwise comparisons
c172code | c161sex | Contrast | 95% CI | p
---------------------------------------------------------
1-2 | male | -3.89 | -12.55, 4.77 | 0.378
1-3 | male | 0.86 | -9.28, 10.99 | 0.868
1 | male-female | -0.95 | -9.39, 7.50 | 0.825
1-2 | male-female | -3.56 | -11.32, 4.20 | 0.368
1-3 | male-female | -3.12 | -11.85, 5.62 | 0.484
2-3 | male | 4.75 | -3.56, 13.06 | 0.262
2-1 | male-female | 2.94 | -3.21, 9.10 | 0.348
2 | male-female | 0.33 | -4.83, 5.49 | 0.899
2-3 | male-female | 0.78 | -5.74, 7.29 | 0.815
3-1 | male-female | -1.81 | -9.89, 6.28 | 0.661
3-2 | male-female | -4.42 | -11.78, 2.95 | 0.239
3 | male-female | -3.97 | -12.34, 4.40 | 0.352
1-2 | female | -2.61 | -7.37, 2.15 | 0.282
1-3 | female | -2.17 | -8.39, 4.05 | 0.494
2-3 | female | 0.44 | -4.80, 5.69 | 0.869
print hypothesis_test collapse CI
Code
print(out)
Output
# Pairwise comparisons
e42dep | Contrast | 95% CI | p
-----------------------------------------
1-2 | 8.67 | 3.72, 13.61 | < .001
1-3 | 21.19 | 16.38, 25.99 | < .001
1-4 | 61.19 | 56.34, 66.05 | < .001
2-3 | 12.52 | 9.40, 15.64 | < .001
2-4 | 52.53 | 49.32, 55.73 | < .001
3-4 | 40.01 | 37.10, 42.92 | < .001
Code
print(out, collapse_ci = TRUE)
Output
# Pairwise comparisons
e42dep | Contrast (95% CI) | p
--------------------------------------
1-2 | 8.67 (3.72, 13.61) | < .001
1-3 | 21.19 (16.38, 25.99) | < .001
1-4 | 61.19 (56.34, 66.05) | < .001
2-3 | 12.52 (9.40, 15.64) | < .001
2-4 | 52.53 (49.32, 55.73) | < .001
3-4 | 40.01 (37.10, 42.92) | < .001
hypothesis_test, ci-level
Code
print(out)
Output
# Pairwise comparisons
Species | Contrast | 95% CI | p
-------------------------------------------------------
setosa-versicolor | -0.93 | -1.13, -0.73 | < .001
setosa-virginica | -1.58 | -1.79, -1.38 | < .001
versicolor-virginica | -0.65 | -0.86, -0.45 | < .001
Code
print(out)
Output
# Pairwise comparisons
Species | Contrast | 80% CI | p
-------------------------------------------------------
setosa-versicolor | -0.93 | -1.06, -0.80 | < .001
setosa-virginica | -1.58 | -1.71, -1.45 | < .001
versicolor-virginica | -0.65 | -0.78, -0.52 | < .001
glmmTMB, orderedbeta
Code
print(test_predictions(out2))
Output
# Pairwise comparisons
gear | Contrast | 95% CI | p
-------------------------------------
4-3 | 0.03 | -0.06, 0.12 | 0.471
4-5 | -0.02 | -0.15, 0.12 | 0.820
3-5 | -0.05 | -0.18, 0.09 | 0.489
Message
Contrasts are presented as proportions (in %-points).
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print hypothesis_test simple contrast link scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
------------------------------------------
0-1 | -0.07 | -1.19, 1.05 | 0.901
Message
Contrasts are presented as log-odds.
print hypothesis_test simple predictions link scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
--------------------------------------------
0 | -1.14 | -2.06, -0.22 | 0.015
1 | -1.07 | -2.24, 0.11 | 0.076
Message
Predictions are presented as log-odds.
print hypothesis_test simple contrast exp scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
-----------------------------------------
0-1 | 0.99 | 0.80, 1.22 | 0.902
Message
Contrasts are presented on the exponentiated scale.
print hypothesis_test simple contrast odds ratio scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
-----------------------------------------
0-1 | 0.93 | 0.30, 2.86 | 0.901
Message
Contrasts are presented as odds ratios.
print hypothesis_test simple contrast response scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | Contrast | 95% CI | p
------------------------------------------
0-1 | -0.01 | -0.22, 0.20 | 0.902
Message
Contrasts are presented as probabilities (in %-points).
print hypothesis_test simple predictions exp scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
------------------------------------------
0 | 1.27 | 1.08, 1.51 | 0.005
1 | 1.29 | 1.03, 1.62 | 0.025
Message
Predictions are presented on the exponentiated scale.
print hypothesis_test simple predictions odds ratio scale
Code
print(out)
Output
var_binom | Predicted | 95% CI | p
------------------------------------------
0 | 0.32 | 0.13, 0.80 | 0.015
1 | 0.34 | 0.11, 1.12 | 0.076
Message
Predictions are presented as odds ratios.
print hypothesis_test contrasts link scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
--------------------------------------------------------
0-1 | 2.48-2.48 | -0.37 | -1.91, 1.18 | 0.644
0-0 | 2.48-9.25 | -0.12 | -0.60, 0.35 | 0.610
0-1 | 2.48-9.25 | -0.19 | -1.43, 1.04 | 0.758
0-0 | 2.48-16.02 | -0.25 | -1.19, 0.70 | 0.610
0-1 | 2.48-16.02 | -0.02 | -1.86, 1.82 | 0.980
1-0 | 2.48-9.25 | 0.24 | -1.21, 1.70 | 0.745
1-1 | 2.48-9.25 | 0.17 | -1.00, 1.34 | 0.774
1-0 | 2.48-16.02 | 0.12 | -1.39, 1.63 | 0.878
1-1 | 2.48-16.02 | 0.34 | -1.99, 2.68 | 0.774
0-1 | 9.25-9.25 | -0.07 | -1.19, 1.05 | 0.901
0-0 | 9.25-16.02 | -0.12 | -0.60, 0.35 | 0.610
0-1 | 9.25-16.02 | 0.10 | -1.67, 1.87 | 0.912
1-0 | 9.25-16.02 | -0.05 | -1.25, 1.14 | 0.932
1-1 | 9.25-16.02 | 0.17 | -1.00, 1.34 | 0.774
0-1 | 16.02-16.02 | 0.22 | -1.59, 2.04 | 0.810
Message
Contrasts are presented as log-odds.
print hypothesis_test predictions link scale
Code
print(out)
Output
var_binom | var_cont | Predicted | 95% CI | p
-------------------------------------------------------
0 | 2.48 | -1.26 | -2.33, -0.19 | 0.021
1 | 2.48 | -0.90 | -2.39, 0.60 | 0.240
0 | 9.25 | -1.14 | -2.06, -0.22 | 0.015
1 | 9.25 | -1.07 | -2.25, 0.11 | 0.076
0 | 16.02 | -1.02 | -2.01, -0.02 | 0.046
1 | 16.02 | -1.24 | -3.04, 0.57 | 0.179
Message
Predictions are presented as log-odds.
print hypothesis_test contrasts exp scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
-------------------------------------------------------
0-1 | 2.48-2.48 | 0.93 | 0.69, 1.27 | 0.658
0-0 | 2.48-9.25 | 0.98 | 0.90, 1.06 | 0.596
0-1 | 2.48-9.25 | 0.97 | 0.77, 1.21 | 0.760
0-0 | 2.48-16.02 | 0.96 | 0.80, 1.14 | 0.608
0-1 | 2.48-16.02 | 1.00 | 0.72, 1.37 | 0.980
1-0 | 2.48-9.25 | 1.05 | 0.78, 1.41 | 0.754
1-1 | 2.48-9.25 | 1.03 | 0.82, 1.31 | 0.780
1-0 | 2.48-16.02 | 1.02 | 0.75, 1.39 | 0.880
1-1 | 2.48-16.02 | 1.07 | 0.69, 1.65 | 0.771
0-1 | 9.25-9.25 | 0.99 | 0.80, 1.22 | 0.902
0-0 | 9.25-16.02 | 0.98 | 0.89, 1.07 | 0.619
0-1 | 9.25-16.02 | 1.02 | 0.75, 1.39 | 0.910
1-0 | 9.25-16.02 | 0.99 | 0.79, 1.25 | 0.932
1-1 | 9.25-16.02 | 1.03 | 0.84, 1.26 | 0.761
0-1 | 16.02-16.02 | 1.04 | 0.75, 1.44 | 0.803
Message
Contrasts are presented on the exponentiated scale.
print hypothesis_test contrasts response scale
Code
print(out)
Output
# Pairwise comparisons
var_binom | var_cont | Contrast | 95% CI | p
--------------------------------------------------------
0-1 | 2.48-2.48 | -0.07 | -0.38, 0.24 | 0.658
0-0 | 2.48-9.25 | -0.02 | -0.10, 0.06 | 0.596
0-1 | 2.48-9.25 | -0.04 | -0.26, 0.19 | 0.760
0-0 | 2.48-16.02 | -0.05 | -0.22, 0.13 | 0.608
0-1 | 2.48-16.02 | 0.00 | -0.32, 0.32 | 0.980
1-0 | 2.48-9.25 | 0.05 | -0.25, 0.34 | 0.754
1-1 | 2.48-9.25 | 0.03 | -0.20, 0.27 | 0.780
1-0 | 2.48-16.02 | 0.02 | -0.28, 0.33 | 0.880
1-1 | 2.48-16.02 | 0.06 | -0.37, 0.50 | 0.771
0-1 | 9.25-9.25 | -0.01 | -0.22, 0.20 | 0.902
0-0 | 9.25-16.02 | -0.02 | -0.12, 0.07 | 0.619
0-1 | 9.25-16.02 | 0.02 | -0.29, 0.33 | 0.910
1-0 | 9.25-16.02 | -0.01 | -0.24, 0.22 | 0.932
1-1 | 9.25-16.02 | 0.03 | -0.17, 0.23 | 0.761
0-1 | 16.02-16.02 | 0.04 | -0.28, 0.36 | 0.803
Message
Contrasts are presented as probabilities (in %-points).
print hypothesis_test predictions exp scale
Code
print(out)
Output
var_binom | var_cont | Predicted | 95% CI | p
-----------------------------------------------------
0 | 2.48 | 1.25 | 1.04, 1.50 | 0.019
1 | 2.48 | 1.34 | 0.98, 1.82 | 0.065
0 | 9.25 | 1.27 | 1.08, 1.51 | 0.005
1 | 9.25 | 1.29 | 1.03, 1.62 | 0.025
0 | 16.02 | 1.30 | 1.07, 1.59 | 0.007
1 | 16.02 | 1.25 | 0.91, 1.71 | 0.161
Message
Predictions are presented on the exponentiated scale.
print hypothesis_test comma and dash levels
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
------------------------------------------------------------------------------
and, another, comma-and, another, comma | a-b | 0.02 | -0.12, 0.16 | 0.796
and, another, comma-no comma | a-a | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-no comma | a-b | -0.13 | -0.36, 0.10 | 0.255
and, another, comma-with, comma | a-a | -0.07 | -0.24, 0.09 | 0.380
and, another, comma-with, comma | a-b | -0.06 | -0.27, 0.16 | 0.610
and, another, comma-no comma | b-a | -0.17 | -0.40, 0.06 | 0.147
and, another, comma-no comma | b-b | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-with, comma | b-a | -0.09 | -0.32, 0.13 | 0.412
and, another, comma-with, comma | b-b | -0.07 | -0.24, 0.09 | 0.380
no comma-no comma | a-b | 0.02 | -0.12, 0.16 | 0.796
no comma-with, comma | a-a | 0.08 | -0.10, 0.26 | 0.402
no comma-with, comma | a-b | 0.10 | -0.13, 0.32 | 0.407
no comma-with, comma | b-a | 0.06 | -0.18, 0.29 | 0.625
no comma-with, comma | b-b | 0.08 | -0.10, 0.26 | 0.402
with, comma-with, comma | a-b | 0.02 | -0.12, 0.16 | 0.796
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
--------------------------------------------------------------------------------------------------
and, another, comma-and, another, comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
and, another, comma-no comma | comma, here-comma, here | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-no comma | comma, here-nothere | -0.13 | -0.36, 0.10 | 0.255
and, another, comma-with, comma | comma, here-comma, here | -0.07 | -0.24, 0.09 | 0.380
and, another, comma-with, comma | comma, here-nothere | -0.06 | -0.27, 0.16 | 0.610
and, another, comma-no comma | nothere-comma, here | -0.17 | -0.40, 0.06 | 0.147
and, another, comma-no comma | nothere-nothere | -0.15 | -0.33, 0.03 | 0.099
and, another, comma-with, comma | nothere-comma, here | -0.09 | -0.32, 0.13 | 0.412
and, another, comma-with, comma | nothere-nothere | -0.07 | -0.24, 0.09 | 0.380
no comma-no comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
no comma-with, comma | comma, here-comma, here | 0.08 | -0.10, 0.26 | 0.402
no comma-with, comma | comma, here-nothere | 0.10 | -0.13, 0.32 | 0.407
no comma-with, comma | nothere-comma, here | 0.06 | -0.18, 0.29 | 0.625
no comma-with, comma | nothere-nothere | 0.08 | -0.10, 0.26 | 0.402
with, comma-with, comma | comma, here-nothere | 0.02 | -0.12, 0.16 | 0.796
Code
print(ht)
Output
# Pairwise comparisons
f1 | f2 | Contrast | 95% CI | p
------------------------------------------------------------------------------
and-dash | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
and-dash-no dash | comma, here | -0.15 | -0.33, 0.03 | 0.099
and-dash-no dash | comma, here-dash-there | -0.13 | -0.36, 0.10 | 0.255
and-dash-with, comma | comma, here | -0.07 | -0.24, 0.09 | 0.380
and-dash-with, comma | comma, here-dash-there | -0.06 | -0.27, 0.16 | 0.610
and-dash-no dash | dash-there-comma, here | -0.17 | -0.40, 0.06 | 0.147
and-dash-no dash | dash-there | -0.15 | -0.33, 0.03 | 0.099
and-dash-with, comma | dash-there-comma, here | -0.09 | -0.32, 0.13 | 0.412
and-dash-with, comma | dash-there | -0.07 | -0.24, 0.09 | 0.380
no dash | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
no dash-with, comma | comma, here | 0.08 | -0.10, 0.26 | 0.402
no dash-with, comma | comma, here-dash-there | 0.10 | -0.13, 0.32 | 0.407
no dash-with, comma | dash-there-comma, here | 0.06 | -0.18, 0.29 | 0.625
no dash-with, comma | dash-there | 0.08 | -0.10, 0.26 | 0.402
with, comma | comma, here-dash-there | 0.02 | -0.12, 0.16 | 0.796
print hypothesis_test collapse levels
Code
print(out)
Output
# Pairwise comparisons
c172code | c161sex | Contrast | 95% CI | p
---------------------------------------------------------
1-2 | male | -3.89 | -12.55, 4.77 | 0.378
1-3 | male | 0.86 | -9.28, 10.99 | 0.868
1 | male-female | -0.95 | -9.39, 7.50 | 0.825
1-2 | male-female | -3.56 | -11.32, 4.20 | 0.368
1-3 | male-female | -3.12 | -11.85, 5.62 | 0.484
2-3 | male | 4.75 | -3.56, 13.06 | 0.262
2-1 | male-female | 2.94 | -3.21, 9.10 | 0.348
2 | male-female | 0.33 | -4.83, 5.49 | 0.899
2-3 | male-female | 0.78 | -5.74, 7.29 | 0.815
3-1 | male-female | -1.81 | -9.89, 6.28 | 0.661
3-2 | male-female | -4.42 | -11.78, 2.95 | 0.239
3 | male-female | -3.97 | -12.34, 4.40 | 0.352
1-2 | female | -2.61 | -7.37, 2.15 | 0.282
1-3 | female | -2.17 | -8.39, 4.05 | 0.494
2-3 | female | 0.44 | -4.80, 5.69 | 0.869
print hypothesis_test collapse CI
Code
print(out)
Output
# Pairwise comparisons
e42dep | Contrast | 95% CI | p
-----------------------------------------
1-2 | 8.67 | 3.72, 13.61 | < .001
1-3 | 21.19 | 16.38, 25.99 | < .001
1-4 | 61.19 | 56.34, 66.05 | < .001
2-3 | 12.52 | 9.40, 15.64 | < .001
2-4 | 52.53 | 49.32, 55.73 | < .001
3-4 | 40.01 | 37.10, 42.92 | < .001
Code
print(out, collapse_ci = TRUE)
Output
# Pairwise comparisons
e42dep | Contrast (95% CI) | p
--------------------------------------
1-2 | 8.67 (3.72, 13.61) | < .001
1-3 | 21.19 (16.38, 25.99) | < .001
1-4 | 61.19 (56.34, 66.05) | < .001
2-3 | 12.52 (9.40, 15.64) | < .001
2-4 | 52.53 (49.32, 55.73) | < .001
3-4 | 40.01 (37.10, 42.92) | < .001
hypothesis_test, ci-level
Code
print(out)
Output
# Pairwise comparisons
Species | Contrast | 95% CI | p
-------------------------------------------------------
setosa-versicolor | -0.93 | -1.13, -0.73 | < .001
setosa-virginica | -1.58 | -1.79, -1.38 | < .001
versicolor-virginica | -0.65 | -0.86, -0.45 | < .001
Code
print(out)
Output
# Pairwise comparisons
Species | Contrast | 80% CI | p
-------------------------------------------------------
setosa-versicolor | -0.93 | -1.06, -0.80 | < .001
setosa-virginica | -1.58 | -1.71, -1.45 | < .001
versicolor-virginica | -0.65 | -0.78, -0.52 | < .001
glmmTMB, orderedbeta
Code
print(test_predictions(out2))
Output
# Pairwise comparisons
gear | Contrast | 95% CI | p
-------------------------------------
4-3 | 0.03 | -0.06, 0.12 | 0.471
4-5 | -0.02 | -0.15, 0.12 | 0.820
3-5 | -0.05 | -0.18, 0.09 | 0.489
Message
Contrasts are presented as proportions (in %-points).
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