run_fgsea: Run fgsea using the recommended fgseaMultilevel method
In ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier
run_fgsea R Documentation
Run fgsea using the recommended fgseaMultilevel method
Description
Run fgsea using the recommended fgseaMultilevel method
Usage
run_fgsea(ranked_list, gene_sets, min_size = 10, max_size = 500)
Arguments
ranked_list
A named vector of ranking statistics
gene_sets
A list of pathway gene sets
min_size
An integer specifying the minimum gene set size
max_size
An integer specifying the maximum gene set size
Value
A data frame of fgsea results
ggpicrust2 documentation built on April 10, 2026, 5:06 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| run_fgsea | R Documentation |
Run fgsea using the recommended fgseaMultilevel method
Description
Run fgsea using the recommended fgseaMultilevel method
Usage
run_fgsea(ranked_list, gene_sets, min_size = 10, max_size = 500)
Arguments
ranked_list |
A named vector of ranking statistics |
gene_sets |
A list of pathway gene sets |
min_size |
An integer specifying the minimum gene set size |
max_size |
An integer specifying the maximum gene set size |
Value
A data frame of fgsea results
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.