ggpubr: 'ggplot2' Based Publication Ready Plots

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'ggplot2' is an excellent and flexible package for elegant data visualization in R. However the default generated plots requires some formatting before we can send them for publication. Furthermore, to customize a 'ggplot', the syntax is opaque and this raises the level of difficulty for researchers with no advanced R programming skills. 'ggpubr' provides some easy-to-use functions for creating and customizing 'ggplot2'- based publication ready plots.

Author
Alboukadel Kassambara [aut, cre]
Date of publication
2016-12-05 15:22:10
Maintainer
Alboukadel Kassambara <alboukadel.kassambara@gmail.com>
License
GPL-2
Version
0.1.1
URLs

View on CRAN

Man pages

desc_statby
Descriptive statistics by groups
diff_express
Differential gene expression analysis results
geom_exec
Execute ggplot2 functions
ggbarplot
Bar plot
ggboxplot
Box plot
ggdensity
Density plot
ggdotchart
Cleveland's Dot Plots
ggdotplot
Dot plot
ggecdf
Empirical cumulative density function
ggerrorplot
Visualizing Error
gghistogram
Histogram plot
ggline
Line plot
ggmaplot
MA-plot from means and log fold changes
ggpar
Graphical parameters
ggpie
Pie chart
ggqqplot
QQ Plots
ggscatter
Scatter plot
ggstripchart
Stripcharts
ggtext
Text
ggviolin
Violin plot
show_line_types
Line types available in R
show_point_shapes
Point shapes available in R
stat_chull
Plot convex hull of a set of points
stat_conf_ellipse
Plot confidence ellipses.
stat_mean
Draw group mean points
theme_pubr
Publication ready theme

Files in this package

ggpubr
ggpubr/NAMESPACE
ggpubr/NEWS.md
ggpubr/data
ggpubr/data/diff_express.rda
ggpubr/R
ggpubr/R/stat_conf_ellipse.R
ggpubr/R/show_line_types.R
ggpubr/R/ggstripchart.R
ggpubr/R/ggviolin.R
ggpubr/R/ggtext.R
ggpubr/R/ggpar.R
ggpubr/R/ggboxplot.R
ggpubr/R/gghistogram.R
ggpubr/R/ggbarplot.R
ggpubr/R/ggdotchart.R
ggpubr/R/show_point_shapes.R
ggpubr/R/theme_pubr.R
ggpubr/R/ggmaplot.R
ggpubr/R/utilities.R
ggpubr/R/ggerrorplot.R
ggpubr/R/ggdensity.R
ggpubr/R/ggline.R
ggpubr/R/diff_express.R
ggpubr/R/desc_statby.R
ggpubr/R/ggscatter.R
ggpubr/R/ggecdf.R
ggpubr/R/ggqqplot.R
ggpubr/R/geom_exec.R
ggpubr/R/ggpie.R
ggpubr/R/stat_chull.R
ggpubr/R/stat_mean.R
ggpubr/R/ggdotplot.R
ggpubr/README.md
ggpubr/MD5
ggpubr/DESCRIPTION
ggpubr/man
ggpubr/man/ggdotchart.Rd
ggpubr/man/ggbarplot.Rd
ggpubr/man/ggstripchart.Rd
ggpubr/man/ggpar.Rd
ggpubr/man/stat_conf_ellipse.Rd
ggpubr/man/geom_exec.Rd
ggpubr/man/desc_statby.Rd
ggpubr/man/stat_chull.Rd
ggpubr/man/ggdotplot.Rd
ggpubr/man/ggqqplot.Rd
ggpubr/man/ggviolin.Rd
ggpubr/man/ggerrorplot.Rd
ggpubr/man/gghistogram.Rd
ggpubr/man/ggline.Rd
ggpubr/man/theme_pubr.Rd
ggpubr/man/ggtext.Rd
ggpubr/man/ggpie.Rd
ggpubr/man/stat_mean.Rd
ggpubr/man/ggecdf.Rd
ggpubr/man/ggboxplot.Rd
ggpubr/man/show_point_shapes.Rd
ggpubr/man/ggmaplot.Rd
ggpubr/man/diff_express.Rd
ggpubr/man/ggscatter.Rd
ggpubr/man/ggdensity.Rd
ggpubr/man/show_line_types.Rd