View source: R/autoplot-generic-spct.R
generic_plot | R Documentation |
This function returns a ggplot object with an annotated plot of a
generic_spct object
.
generic_plot(
spct,
y.name,
ymin.name,
ymax.name,
ylab,
w.band,
range,
label.qty,
span,
wls.target,
annotations,
text.size,
idfactor,
facets,
ylim,
na.rm
)
spct |
a generic_spct object |
y.name , ymin.name , ymax.name |
character Names of the columns to be mapped to the y aesthetic. |
ylab |
character or expression The y-axis label. |
w.band |
list of waveband objects |
range |
an R object on which range() returns a vector of length 2, with min annd max wavelengths (nm) |
label.qty |
character string giving the type of summary quantity to use for labels, one of "mean", "total", "contribution", and "relative". |
span |
a peak is defined as an element in a sequence which is greater than all other elements within a window of width span centered at that element. |
wls.target |
numeric vector indicating the spectral quantity values for
which wavelengths are to be searched and interpolated if need. The
|
annotations |
a character vector |
text.size |
numeric size of text in the plot decorations. |
idfactor |
character Name of an index column in data holding a
|
facets |
logical or integer Indicating if facets are to be created for
the levels of |
ylim |
numeric y axis limits, |
na.rm |
logical. |
a ggplot
object.
Note that scales are expanded so as to make space for the annotations. The object returned is a ggplot object, and can be further manipulated. When spct has more than one column with spectral data, each of these columns is normalized individually.
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