gkmSVM: Gapped-Kmer Support Vector Machine

Imports the 'gkmSVM' v2.0 functionalities into R <http://www.beerlab.org/gkmsvm/> It also uses the 'kernlab' library (separate R package by different authors) for various SVM algorithms. Users should note that the suggested packages 'rtracklayer', 'GenomicRanges', 'BSgenome', 'BiocGenerics', 'Biostrings', 'GenomeInfoDb', 'IRanges', and 'S4Vectors' are all BioConductor packages <https://bioconductor.org>.

Package details

AuthorMahmoud Ghandi
MaintainerMike Beer <mbeer@jhu.edu>
LicenseGPL (>= 2)
Version0.80.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("gkmSVM")

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gkmSVM documentation built on Feb. 25, 2020, 9:06 a.m.