glmmBUGS: Generalised Linear Mixed Models with BUGS and JAGS

Automates running Generalized Linear Mixed Models, including spatial models, with WinBUGS, OpenBUGS and JAGS. Models are specified with formulas, with the package writings model files, arranging unbalanced data in ragged arrays, and creating starting values. The model is re-parameterized, and functions are provided for converting model outputs to the original parameterization.

AuthorPatrick Brown, Lutong Zhou
Date of publication2016-09-22 01:23:55
MaintainerPatrick Brown <patrick.brown@utoronto.ca>
LicenseGPL
Version2.4.0

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Files in this package

glmmBUGS
glmmBUGS/inst
glmmBUGS/inst/CITATION
glmmBUGS/inst/doc
glmmBUGS/inst/doc/jags.pdf
glmmBUGS/inst/doc/jags.Rnw
glmmBUGS/inst/doc/jags.R
glmmBUGS/tests
glmmBUGS/tests/bym.R
glmmBUGS/tests/openbugs.R
glmmBUGS/NAMESPACE
glmmBUGS/data
glmmBUGS/data/muscleResult.RData
glmmBUGS/data/ontario.RData
glmmBUGS/data/rongelapUTM.RData
glmmBUGS/data/ontarioResult.RData
glmmBUGS/data/popDataAdjMat.RData
glmmBUGS/data/rongelapResult.RData
glmmBUGS/R
glmmBUGS/R/glmmPQLstrings.R glmmBUGS/R/startingFunction.R glmmBUGS/R/cholInvArray.R glmmBUGS/R/getRaggedSeq.R glmmBUGS/R/checkChain.R glmmBUGS/R/getStartingValues.R glmmBUGS/R/binToBinom.R glmmBUGS/R/winBugsRaggedArray.R glmmBUGS/R/addSpatial.R glmmBUGS/R/glmmBUGS.R glmmBUGS/R/mergeBugsData.R glmmBUGS/R/getDesignMatrix.R glmmBUGS/R/summaryChain.R glmmBUGS/R/writeBugsModel.R glmmBUGS/R/restoreParams.R
glmmBUGS/vignettes
glmmBUGS/vignettes/Makefile
glmmBUGS/vignettes/jags-checkChain.pdf
glmmBUGS/vignettes/bacteria.txt
glmmBUGS/vignettes/jags.Rnw
glmmBUGS/vignettes/jags-checkChainM.pdf
glmmBUGS/vignettes/model.bug
glmmBUGS/vignettes/getInits.R
glmmBUGS/MD5
glmmBUGS/build
glmmBUGS/build/vignette.rds
glmmBUGS/DESCRIPTION
glmmBUGS/man
glmmBUGS/man/getStartingValues.Rd glmmBUGS/man/rongelapUTM.Rd glmmBUGS/man/addSpatial.Rd glmmBUGS/man/checkChain.Rd glmmBUGS/man/ontarioResult.Rd glmmBUGS/man/writeBugsModel.Rd glmmBUGS/man/cholInvArray.Rd glmmBUGS/man/restoreParams.Rd glmmBUGS/man/getDesignMatrix.Rd glmmBUGS/man/glmmBUGS.Rd glmmBUGS/man/getRaggedSeq.Rd glmmBUGS/man/summaryChain.Rd glmmBUGS/man/startingFunction.Rd glmmBUGS/man/muscleResult.Rd glmmBUGS/man/winBugsRaggedArray.Rd glmmBUGS/man/binToBinom.Rd glmmBUGS/man/popDataAdjMat.Rd glmmBUGS/man/glmmPQLstrings.Rd glmmBUGS/man/mergeBugsData.Rd glmmBUGS/man/ontario.Rd

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