Nothing
#!/usr/bin/env Rscript
source(file.path(Sys.getenv("GMSP_SCRIPT_ROOT"), "tools", "setup.R"))
source(.scriptHere("gmsp", "global.R"))
source(.scriptHere("imf", "setup.R"))
FILES <- c("IMF.csv", "IMFF.csv")
Args <- commandArgs(trailingOnly = TRUE)
PATH.config <- .resolvePath(if (length(Args)) Args[1L] else
"scripts/imf/runCompileIMF.json")
Config <- .readJson(PATH.config, simplifyVector = FALSE)
PATH.source <- .resolvePath(.jsonRequire(Config, c("path", "source"),
PATH.config))
PATH.imf <- file.path(PATH.source, "imf")
Records <- .readCharacterVector(.jsonGet(Config, c("recordID"),
default = NULL),
"recordID", allowNull = TRUE)
if (!dir.exists(PATH.imf)) {
stop(sprintf("Missing IMF folder: %s", PATH.imf), call. = FALSE)
}
DT <- .readIMFSelection(PATH.source)
if (length(Records)) DT <- DT[RecordID %chin% Records]
if (!nrow(DT)) stop("No records selected for IMF compilation.", call. = FALSE)
Manifest <- .buildManifest(PATH.imf, DT)
.writeAggregateTables(PATH.imf, Manifest, files = FILES)
invisible(file.copy(PATH.config, file.path(PATH.imf, "runCompileIMF.json"),
overwrite = TRUE))
message(sprintf("Compiled IMF checkpoints for %s done records to %s",
Manifest[status == "done", uniqueN(RecordID)], PATH.imf))
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