gpDDE: General Profiling Method for Delay Differential Equation
Version 0.8.2

Functions implement collocation-inference for stochastic process driven by distributed delay differential equations. They also provide tools for selecting the lags for distributed delay using shrinkage methods, estimating time-varying coefficients, and tools for inference and prediction.

AuthorZiqian Zhou [aut, cre], Kung-Sik Chan [aut]
Date of publication2015-12-16 23:25:34
MaintainerZiqian Zhou <ziqian-zhou@uiowa.edu>
LicenseGPL (>= 2)
Version0.8.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("gpDDE")

Popular man pages

blowflydata: Nicholson's Blowflies Data.
DDEdiag: Time Series Diagnostics for the Residuals
DSIRInitCoefs: Initial values for the spline coefficients for the Delay SIR...
IntegrateForward.DDE: Intergrate Forward a DDE Model
Profile.LS.DDE: Profile Estimation Functions for DDE
Profile.LS.TV.DDE: Profile Estimation Functions for DDE with Time Varying...
sparse.DDE: Sparsity selection for the lags of delay.
See all...

All man pages Function index File listing

Man pages

blowflydata: Nicholson's Blowflies Data.
DDEdiag: Time Series Diagnostics for the Residuals
DSIRdata: Simulated dataset from a delay SIR model
DSIR.fit: Fitted Delay SIR model
DSIRfn.make: Make DTVSIR functions
DSIRInitCoefs: Initial values for the spline coefficients for the Delay SIR...
DTVSIRfn.make: Make DTVSIR functions
forecast.DDE: Compute and Plot the Forecasts Based on a Fitted DDE Model
inneropt.DDE: Inner optimization for estmating coefficients given...
IntegrateForward.DDE: Intergrate Forward a DDE Model
make.vector.disease.fn: Make Vector Disease functions
Profile.LS.DDE: Profile Estimation Functions for DDE
Profile.LS.TV.DDE: Profile Estimation Functions for DDE with Time Varying...
ProfileSSE.covariance.DDE: ProfileSSE.covariance.DDE
sparse.DDE: Sparsity selection for the lags of delay.
sparse.TV.DDE: Sparsity selection for the lags of delay and time varying...

Functions

Files

NAMESPACE
data
data/DSIRdata.RData
data/DSIR.fit.rda
data/blowflydata.RData
data/DSIRinit.RData
R
R/LS.dde.R
R/IntegrateForward.DDE.R
R/forecast.DDE.R
R/data.R
R/timevar.R
R/make.DSIR.R
R/tv-delay.R
R/tv-delay-cov.R
R/DDEdiag.R
R/poslasso.R
R/dde.R
R/vector.D.funcs.R
R/make.blowfly.R
MD5
DESCRIPTION
man
man/DSIR.fit.Rd
man/inneropt.DDE.Rd
man/Profile.LS.DDE.Rd
man/DSIRInitCoefs.Rd
man/sparse.DDE.Rd
man/DSIRfn.make.Rd
man/DSIRdata.Rd
man/make.vector.disease.fn.Rd
man/sparse.TV.DDE.Rd
man/Profile.LS.TV.DDE.Rd
man/DDEdiag.Rd
man/DTVSIRfn.make.Rd
man/IntegrateForward.DDE.Rd
man/blowflydata.Rd
man/ProfileSSE.covariance.DDE.Rd
man/forecast.DDE.Rd
gpDDE documentation built on May 20, 2017, 2:05 a.m.

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