CreateConvolutionTable: Create Convolution Table from a Seurat object
In grandR: Comprehensive Analysis of Nucleotide Conversion Sequencing Data
CreateConvolutionTable R Documentation
Create Convolution Table from a Seurat object
Description
Create Convolution Table from a Seurat object
Usage
CreateConvolutionTable(data, n.neighbors = 20)
Arguments
data
a Seurat object
n.neighbors
the number of neighbors to be convoluted
Details
This function returns a table which can be used as input for GRAND3. Note that a data set contatining multiple time points should be split before convolution.
Value
a table with two columns "Cell" and "Pseudobulk"
grandR documentation built on April 4, 2025, 2:27 a.m.
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| CreateConvolutionTable | R Documentation |
Create Convolution Table from a Seurat object
Description
Create Convolution Table from a Seurat object
Usage
CreateConvolutionTable(data, n.neighbors = 20)
Arguments
data |
a Seurat object |
n.neighbors |
the number of neighbors to be convoluted |
Details
This function returns a table which can be used as input for GRAND3. Note that a data set contatining multiple time points should be split before convolution.
Value
a table with two columns "Cell" and "Pseudobulk"
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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