Files in greatR
Gene Registration from Expression and Time-Courses in R
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/register.R
R/process_data.R
R/summary.R
R/utils-calcs.R
R/distance.R
R/stretch_and_shift.R
R/plots.R
R/utils-data-table.R
R/utils-plots.R
R/compare_dynamics.R
R/greatR-package.R
R/optimisation.R
R/utils.R
inst/doc/register-data.R
inst/doc/register-data.Rmd
inst/doc/register-data.html
inst/doc/process-results.R
inst/doc/data-requirement.html
inst/doc/register-data-manually.R
inst/doc/process-results.html
inst/doc/register-data-manually.Rmd
inst/doc/data-requirement.R
inst/doc/process-results.Rmd
inst/doc/data-requirement.Rmd
inst/doc/register-data-manually.html
inst/extdata/arabidopsis_SOC1_data.csv
inst/extdata/brapa_arabidopsis_registration.rds
inst/extdata/brapa_arabidopsis_data.csv
inst/extdata/brapa_SOC1_data.csv
inst/extdata/sample_data/arabidopsis_expression_5genes.rds
inst/extdata/sample_data/id_table_5genes.rds
inst/extdata/sample_data/arabidopsis_expression.rds
inst/extdata/sample_data/brassica_rapa_expression.rds
inst/extdata/sample_data/brassica_rapa_expression_5genes.rds
inst/extdata/sample_data/id_table.rds
build/vignette.rds
tests/testthat.R
tests/testthat/test-optimisation.R
tests/testthat/test-utils.R
tests/testthat/test-registration.R
tests/testthat/test-results.R
tests/testthat/test-utils-calcs.R
tests/testthat/test-dynamics.R
vignettes/register-data.Rmd
vignettes/register-data-manually.Rmd
vignettes/process-results.Rmd
vignettes/data-requirement.Rmd
vignettes/figures/input_table.png
vignettes/figures/visualisation_diagram.png
vignettes/figures/registration_manual_diagram.png
vignettes/figures/input_list_vectors.png
vignettes/figures/registration_params_table.png
vignettes/figures/registration_opt_diagram.png
vignettes/figures/input_list_tables.png
vignettes/figures/input_diagram.png
man/calculate_distance.Rd
man/register.Rd
man/plot.Rd
man/get_approximate_stretch.Rd
man/summary.Rd
man/figures/logo.png
man/figures/greatR_workflow.png
