gpdpPost | R Documentation |
An internal function to gpdpgrow
gpdpPost(
y,
ipr,
Omega_t,
Omega_s,
gp_mod,
jitter,
gp_shape,
gp_rate,
noise_shape,
noise_rate,
lower,
upper,
w_star,
w,
n_slice_iter,
y_index,
n.iter,
n.burn,
n.thin,
n.tune,
M_init,
dp_shape,
dp_rate,
progress
)
y |
An N x T matrix of N observations of T x 1 functions |
ipr |
An optional input vector of inclusion probabilities for each observation unit in the case
the observed data were acquired through an informative sampling design, so that unbiased
inference about the population requires adjustments to the observed sample. Defaults to
|
Omega_t |
A T x T matrix of squared Eucidean distances for |
Omega_s |
A |
gp_mod |
An L x 1 numeric vector denoting the selected covariance function for each
of |
jitter |
Numeric value added to diagonals of GP covariance matrix to stabilize inversion. |
gp_shape |
The shape parameter of the Gamma base distribution for the |
gp_rate |
The rate parameter of the Gamma base distribution for the |
noise_shape |
The shape parameter of the Gamma base distribution on |
noise_rate |
The rate parameter of the Gamma base distribution on |
lower |
Minimum in range of support for GP covariance parameters, |
upper |
Maximum in range of support for GP covariance parameters, |
w_star |
Tuning parameter for number of locations to sample not linked to observations in the auxiliary Gibbs sampler for cluster assignments. |
w |
Tuning parameter for slice sampling interval width used for GP
covariance parameters, |
n_slice_iter |
Maximum number of steps to widen slice samplind width for
GP covariance parameters, |
y_index |
List object where each contains index of time points to use in |
n.iter |
The number of MCMC sampling iterations |
n.burn |
The number of warm-up iterations to discard |
n.thin |
The interval or step size of post-burn-in samples to return |
n.tune |
The number of tuning iterations to update the slice sampler width, |
M_init |
Starting value of number of clusters for sampling cluster assignments. |
dp_shape |
The shape parameter for the |
dp_rate |
The rate parameter for the |
progress |
An indicator in |
res A list object containing MCMC runs for all model parameters.
Intended as an internal function for gpdpgrow
Terrance Savitsky tds151@gmail.com
gpdpgrow
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