get_ontological_gene_sets: Create list of gene sets defined by ontological annotation

In gsEasy: Gene Set Enrichment Analysis in R

Create list of gene sets defined by ontological annotation

Description

Create list of gene sets defined by ontological annotation

Usage

get_ontological_gene_sets(ontology, gene, term, min_genes = 1, max_genes = 500)

Arguments

ontology	ontology_index object.
gene	Character vector of genes.
term	Character vector of term IDs annotated to corresponding genes.
min_genes	Minimum number of genes in gene sets.
max_genes	Maximum number of genes in gene sets.

Value

List of character vectors of term IDs.

gsEasy documentation built on May 29, 2024, 5 a.m.