gsEasy-package: Gene Set Enrichment Analysis in R

In gsEasy: Gene Set Enrichment Analysis in R

Gene Set Enrichment Analysis in R

Description

R-interface to C++ implementation of the rank/score based GSEA test described by Subramanian et al 2005.

Author(s)

Daniel Greene <[e-mail]>

Maintainer: Daniel Greene <[e-mail]>

References

Subramanian, A, Tamayo, P, Mootha, VK, Mukherjee, S, Ebert, BL, Gillette, MA, Paulovich, A, Pomeroy, SL, Golub, TR, Lander, ES, Mesirov, JP (2005). Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. U.S.A., 102, 43:15545-50, doi: 10.1073/pnas.0506580102.

Ashburner et al. Gene ontology: tool for the unification of biology (2000) Nat Genet 25(1):25-9

gsEasy documentation built on May 29, 2024, 5 a.m.