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In hagis: Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity
hagis-package R Documentation
hagis: Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity
Description
Analysis of plant pathogen pathotype survey data. Functions provided calculate distribution of susceptibilities, distribution of complexities with statistics, pathotype frequency distribution, as well as diversity indices for pathotypes. This package is meant to be a direct replacement for Herrmann, Löwer and Schachtel's (1999) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1046/j.1365-3059.1999.00325.x")} Habgood-Gilmour Spreadsheet, 'HaGiS', previously used for pathotype analysis.
Author(s)
Maintainer: Adam H. Sparks adamhsparks@gmail.com (ORCID)
Authors:
Austin G. McCoy mccoyaus@msu.edu (ORCID) [conceptor]
Zachary Noel noelzach@msu.edu (ORCID) [conceptor]
Martin Chilvers chilvers@msu.edu (ORCID) [thesis advisor]
Other contributors:
Zhian N. Kamvar (ORCID) [contributor, reviewer]
Michigan Soybean Promotion Committee [funder]
Project GREEEN [funder]
North Central Soybean Research Program [funder]
GRDC Project DAQ00186 [funder]
See Also
Useful links:
hagis documentation built on Sept. 8, 2023, 5:20 p.m.
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| hagis-package | R Documentation |
hagis: Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity
Description
Analysis of plant pathogen pathotype survey data. Functions provided calculate distribution of susceptibilities, distribution of complexities with statistics, pathotype frequency distribution, as well as diversity indices for pathotypes. This package is meant to be a direct replacement for Herrmann, Löwer and Schachtel's (1999) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1046/j.1365-3059.1999.00325.x")} Habgood-Gilmour Spreadsheet, 'HaGiS', previously used for pathotype analysis.
Author(s)
Maintainer: Adam H. Sparks adamhsparks@gmail.com (ORCID)
Authors:
Austin G. McCoy mccoyaus@msu.edu (ORCID) [conceptor]
Zachary Noel noelzach@msu.edu (ORCID) [conceptor]
Martin Chilvers chilvers@msu.edu (ORCID) [thesis advisor]
Other contributors:
Zhian N. Kamvar (ORCID) [contributor, reviewer]
Michigan Soybean Promotion Committee [funder]
Project GREEEN [funder]
North Central Soybean Research Program [funder]
GRDC Project DAQ00186 [funder]
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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