| ACEdata | ACE data set |
| allelefreqs | Estimates allele frequencies |
| checkpd | Checks that a covariance matrix is positive definite |
| cor2dprime | Correlations to D' coefficients conversion |
| cortocov | Correlation to covariance conversion |
| covtocor | Covariance to correlation conversion |
| divlocus | Diversity score |
| haplodata | Haplotype object creator |
| haplofreqs | Haplotype frequencies |
| haplosim | Haplotype data simulator |
| ldplot | LD plot |
| makepd | Makes a matrix positive definite |
| mergemats | Merges two LD matrices |
| mse | Mean Square Error |
| sumsqscale | Scales a matrix |
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