haplofreqs: Haplotype frequencies
In hapsim: Haplotype Data Simulation
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
Compute haplotype frequencies
Usage
1
haplofreqs(dat, firstl, lastl)
Arguments
dat
A binary matrix, rows are haplotypes and columns are binary markers
firstl
Position of the first locus
lastl
Position of the last locus
Value
A vector of haplotype frequencies
Author(s)
Giovanni Montana
References
Montana, G. HapSim: a simulation tool for generating haplotype data with
pre-specified allele frequencies and LD coefficients. 2005.
Examples
1
2
data(ACEdata)
freqs <- haplofreqs(ACEdata, 17, 22)
hapsim documentation built on May 1, 2019, 9:11 p.m.
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Description Usage Arguments Value Author(s) References Examples
Description
Compute haplotype frequencies
Usage
1 | haplofreqs(dat, firstl, lastl)
|
Arguments
dat |
A binary matrix, rows are haplotypes and columns are binary markers |
firstl |
Position of the first locus |
lastl |
Position of the last locus |
Value
A vector of haplotype frequencies
Author(s)
Giovanni Montana
References
Montana, G. HapSim: a simulation tool for generating haplotype data with pre-specified allele frequencies and LD coefficients. 2005.
Examples
1 2 | data(ACEdata)
freqs <- haplofreqs(ACEdata, 17, 22)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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