harmony: Fast, Sensitive, and Accurate Integration of Single Cell Data

Implementation of the Harmony algorithm for single cell integration, described in Korsunsky et al <doi:10.1038/s41592-019-0619-0>. Package includes a standalone Harmony function and interfaces to external frameworks.

Package details

AuthorIlya Korsunsky [cre, aut] (<https://orcid.org/0000-0003-4848-3948>), Martin Hemberg [aut] (<https://orcid.org/0000-0001-8895-5239>), Nikolaos Patikas [aut, ctb] (<https://orcid.org/0000-0002-3978-0134>), Hongcheng Yao [aut, ctb] (<https://orcid.org/0000-0002-0743-4835>), Nghia Millard [aut] (<https://orcid.org/0000-0002-0518-7674>), Jean Fan [aut, ctb] (<https://orcid.org/0000-0002-0212-5451>), Kamil Slowikowski [aut, ctb] (<https://orcid.org/0000-0002-2843-6370>), Miles Smith [ctb], Soumya Raychaudhuri [aut] (<https://orcid.org/0000-0002-1901-8265>)
MaintainerIlya Korsunsky <ilya.korsunsky@gmail.com>
LicenseGPL-3
Version1.2.1
URL https://github.com/immunogenomics/harmony
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("harmony")

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harmony documentation built on Sept. 11, 2024, 8:01 p.m.