Man pages for harmony
Fast, Sensitive, and Accurate Integration of Single Cell Data
| cell_lines | List of metadata table and scaled PCs matrix |
| cell_lines_small | Same as cell_lines but smaller (300 cells). |
| harmony | Harmony: fast, accurate, and robust single cell integration. |
| HarmonyMatrix | A proxy call to 'RunHarmony()'. Deprecated. |
| harmony_options | Set advanced options for RunHarmony |
| moe_ridge_get_betas | Get beta Utility |
| pbmc.ctrl | Gene expression data of control PBMC from Kang et al. 2017.... |
| pbmc.stim | Gene expression data of stimulated PBMC from Kang et al.... |
| pipe | Pipe operator |
| RunHarmony | Generic function that runs the harmony algorithm on... |
| RunHarmony.default | This is the primary harmony interface. |
| RunHarmony.Seurat | Applies harmony on a Seurat object cell embedding. |
| RunHarmony.SingleCellExperiment | Applies harmony on PCA cell embeddings of a... |
