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A package for building hierarchical block matrices from association matrices and for performing multi-scale analysis. It specifically targets chromatin contact maps, generated from high-throughput chromosome conformation capture data, such as 5C and Hi-C, and provides methods for detecting movements and for computing chain hierarchy and region communicability across scales.
Package details |
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Author | Yoli Shavit |
Maintainer | Yoli Shavit <ys388@cam.ac.uk> |
License | GPL (>= 2) |
Version | 1.0 |
Package repository | View on CRAN |
Installation |
Install the latest version of this package by entering the following in R:
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