hbm-package: Hierarchical Block Matrix Analysis

Description Details Author(s) References

Description

A package for building hierarchical block matrices from association matrices and for performing multi-scale analysis. It specifically targets chromatin contact maps, generated from high-throughput chromosome conformation capture data, such as 5C and Hi-C, and provides methods for detecting movements and for computing chain hierarchy and region communicability across scales.

Details

Package: hbm
Type: Package
Version: 1.0
Date: 2015-01-25
License: GPL (>=2)

Get started with hbm's tutorials at: http://www.cl.cam.ac.uk/~ys388/hbm/

Author(s)

Yoli Shavit
Maintainer: <[email protected]>

References

hbm's website: http://www.cl.cam.ac.uk/~ys388/hbm/


hbm documentation built on May 29, 2017, 9:06 a.m.