hbm: Hierarchical Block Matrix Analysis

A package for building hierarchical block matrices from association matrices and for performing multi-scale analysis. It specifically targets chromatin contact maps, generated from high-throughput chromosome conformation capture data, such as 5C and Hi-C, and provides methods for detecting movements and for computing chain hierarchy and region communicability across scales.

AuthorYoli Shavit
Date of publication2015-02-01 19:50:29
MaintainerYoli Shavit <ys388@cam.ac.uk>
LicenseGPL (>= 2)
Version1.0

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Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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