humarray: Simplify Analysis and Annotation of Human Microarray Datasets
Version 1.1

Utilises GRanges, data.frame or IRanges objects. Integrates gene annotation for ImmunoChip (or your custom chip) with function calls. Intuitive wrappers for annotation lookup (gene lists, exon ranges, etc) and conversion (e.g, between build 36 and 37 coordinates). Conversion between ensembl and HGNC gene ids, chip ids to rs-ids for SNP-arrays. Retrieval of chromosome and position for gene, band or SNP-ids, or reverse lookup. Simulation functions for ranges objects.

Package details

AuthorNicholas Cooper
Date of publication2017-01-09 09:49:50
MaintainerNicholas Cooper <[email protected]>
LicenseGPL (>= 2)
Version1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("humarray")

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humarray documentation built on May 30, 2017, 4:36 a.m.