convert.textpos.to.data: Convert a chr:pos1-pos2 vector to a matrix
In humarray: Simplify Analysis and Annotation of Human Microarray Datasets
Description
Usage
Arguments
Value
See Also
Examples
Description
Takes standard text positions, such as what you might see on the UCSC genome browser, such as
chr1:10,000,234-11,000,567 for a range, or chrX:234,432 for a SNP, and converts to
with cols: chr, start, end.
Usage
1
Arguments
text
character vector, format like chr:pos1-pos2
Value
a matrix of the same length as 'ranges' with columns chr, start and end, and
rownames will be the same as the original text vector.
See Also
Examples
1
2
txt <- ranged.to.txt(rranges())
convert.textpos.to.data(txt)
humarray documentation built on Nov. 20, 2017, 1:05 a.m.
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Description Usage Arguments Value See Also Examples
Description
Takes standard text positions, such as what you might see on the UCSC genome browser, such as chr1:10,000,234-11,000,567 for a range, or chrX:234,432 for a SNP, and converts to with cols: chr, start, end.
Usage
1 |
Arguments
text |
character vector, format like chr:pos1-pos2 |
Value
a matrix of the same length as 'ranges' with columns chr, start and end, and rownames will be the same as the original text vector.
See Also
Examples
1 2 | txt <- ranged.to.txt(rranges())
convert.textpos.to.data(txt)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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