Description Usage Arguments Value Examples
Returns the locations of cytobands/karyotype-bands in the human genome, for a given build, as a data.frame, or GRanges/RangedData object.
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build |
string, currently 'hg18' or 'hg19' to specify which annotation version to use. Default is build-36/hg-18. Will also accept integers 36,37 as alternative arguments. |
dir |
character, location to store file with the this annotation. If NULL then getOption("save.annot.in.current")>=1 will result in this file being stored in the current directory, or if <=0, then this file will not be stored. |
bioC |
logical, whether to return the annotation as a ranged S4 object (GRanges or RangedData), or as a data.frame |
GRanges |
logical, whether to return a GRanges object, or FALSE to return RangedData |
refresh |
logical, whether to re-download the file if the existing file has become corrupted |
Returns a list, GRanges or RangedData object, depending on input parameters. Contained will be centromere chromosome and start and end positions.
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