Man pages for iSubGen
Integrative Subtype Generation
| apply.scaling | Apply scaling factors |
| calculate.cis.matrix | Calculate consensus integrative correlation matrix |
| calculate.integrative.similarity.matrix | Calculate integrative similarity matrix |
| calculate.scaling | Calculate scaling factors |
| cluster.patients | Clustering to find patient subtypes |
| combine.integrative.features | Combine iSubGen integrative features |
| create.autoencoder | Create an autoencoder for dimensionality reduction |
| create.autoencoder.irf.matrix | Create matrix of independent reduced features |
| load.molecular.aberration.data | Load molecular aberration data |
| read.scaling.factors | Read scaling factors from file |
| write.scaling.factors | Write scaling factors to file |
