Description Usage Arguments Details Value Author(s) Examples
View source: R/read.scaling.factors.R
Read scaling factors from file
1 | read.scaling.factors(scaling.factor.files.dir,data.types);
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scaling.factor.files.dir |
the directory where the files were saved |
data.types |
a vector of the data types with saved scaling factors |
One scale and one center file is saved per data type
a list with a key \"center\" list and a key \"scale\" list. The center and scale list keys match the data.matrices list keys
Natalie Fox
1 2 3 4 5 6 7 8 | # Get the path for the scaling provided in this R package
example.molecular.data.dir <- paste0(path.package('iSubGen'),'/exdata/');
# Example #1: reading scaling factors for a single data type
scaling.factors <- read.scaling.factors(example.molecular.data.dir, 'cna');
# Example #2: reading scaling factors for multiple data types
scaling.factors <- read.scaling.factors(example.molecular.data.dir, c('cna','snv','methy'));
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