read_gmt: write_gmt

Description Usage Arguments Value Author(s)

View source: R/do_geneset.R

Description

parse gmt file to a data.frame

Usage

1
read_gmt(gmtfile, out_type = "data.frame")

Arguments

gmtfile

A GMT file name or URL containing gene sets.

out_type

A character vector of object name. one of "data.frame", "list", "GeneSetCollection"

Value

data.frame, list or GeneSetCollection

Author(s)

Yuanlong Hu


immcp documentation built on Nov. 14, 2020, 5:09 p.m.